Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PCDH11XQ9BZA7 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 PYY2-201ENST00000315776 282 ntBASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 AC098934.1-203ENST00000442868 1262 ntBASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 AC068867.1-201ENST00000559855 150 ntBASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 RN7SL357P-201ENST00000581065 298 ntBASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 FO393412.1-201ENST00000619841 382 ntBASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 AC138466.4-201ENST00000623965 852 ntBASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDH11XQ9BZA7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 CELP-201ENST00000411440 1249 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 PSMD4P1-201ENST00000433951 1109 ntBASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 MIR4472-1-201ENST00000584349 80 ntBASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 AC007250.1-201ENST00000608934 338 ntBASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 AGGF1P1-201ENST00000509500 2073 ntBASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH11XQ9BZA7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
PCDH11XQ9BZA7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PCDH11XQ9BZA7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH11XQ9BZA7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PCDH11XQ9BZA7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PCDH11XQ9BZA7 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDH11XQ9BZA7 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PCDH11XQ9BZA7 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH11XQ9BZA7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH11XQ9BZA7 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDH11XQ9BZA7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH11XQ9BZA7 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
PCDH11XQ9BZA7 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH11XQ9BZA7 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH11XQ9BZA7 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms