Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 AC138761.1-201ENST00000584393 385 ntBASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 AC087386.2-201ENST00000623212 4637 ntBASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 RN7SL752P-201ENST00000463779 287 ntBASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 AL358472.5-202ENST00000641448 1267 ntBASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 AC097359.2-201ENST00000604992 2389 ntBASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM54Q9BYV2 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 AC131212.3-201ENST00000624087 4219 ntBASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 SALL4P5-201ENST00000419001 1760 ntBASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 LINC01230-201ENST00000625222 3017 ntBASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 AC012441.1-201ENST00000446669 685 ntBASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM54Q9BYV2 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms