Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 INE2-201ENST00000630399 1874 ntBASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 SLC45A4-203ENST00000519067 7483 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 RPH3A-202ENST00000415485 4452 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 CYP4F24P-201ENST00000586049 1580 ntBASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 AL607033.1-201ENST00000623900 1599 ntBASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 DPY19L1-201ENST00000310974 4870 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 CCDC152-202ENST00000388827 1237 ntTSL 2 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 AL031133.1-201ENST00000406807 723 ntBASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 AC136604.1-201ENST00000418535 575 ntBASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 PRSS29P-201ENST00000440800 595 ntBASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 AC108073.2-201ENST00000464002 357 ntBASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 TMEM198B-204ENST00000484016 896 ntBASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 FAM86EP-206ENST00000510506 987 ntBASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 RNA5SP410-201ENST00000516285 106 ntBASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 MOK-208ENST00000519058 917 ntTSL 2 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 HNRNPUP1-201ENST00000554987 333 ntBASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 HMGB1P8-201ENST00000558211 949 ntBASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 AC021087.4-201ENST00000563761 564 ntBASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 OR7E47P-204ENST00000575924 449 ntBASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 MIR3180-1-201ENST00000580374 94 ntBASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 MIR3180-3-201ENST00000584616 94 ntBASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 ZNF93-205ENST00000591366 590 ntTSL 3 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 ZNF714-203ENST00000596053 800 ntTSL 2 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 DBP-204ENST00000599385 709 ntTSL 3 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 AL356488.2-201ENST00000602755 427 ntBASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 AL353729.2-201ENST00000605859 1249 ntBASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 AL732292.2-201ENST00000609649 430 ntBASIC4.03□□□□□ -1.76
LCE3DQ9BYE3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms