Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 AC007969.1-201ENST00000433675 447 ntBASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 AC108725.1-201ENST00000495472 409 ntBASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 AC244157.2-201ENST00000616239 1006 ntBASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 TLE1P1-201ENST00000422965 589 ntBASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 GOLGA2P4-201ENST00000441462 777 ntBASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 FAM8A2P-201ENST00000528813 1142 ntBASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 AC138696.2-201ENST00000607376 223 ntBASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 MIR6869-201ENST00000619434 62 ntBASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SSBP3Q9BWW4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
SSBP3Q9BWW4 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms