Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 ZBED1P1-201ENST00000502364 1930 ntBASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 AC104457.1-201ENST00000401024 814 ntBASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 HLA-V-201ENST00000429037 534 ntBASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 MFF-223ENST00000524634 647 ntTSL 2 BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 KRT90P-201ENST00000549264 1064 ntBASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 AC093525.8-201ENST00000624099 1342 ntBASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
PCGF1Q9BSM1 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 AC012508.2-201ENST00000567613 1472 ntBASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 FAM21FP-201ENST00000426241 1131 ntBASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 AC025279.2-201ENST00000569730 653 ntBASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 AC138951.2-201ENST00000623455 1161 ntBASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 RHOXF1P1-202ENST00000635473 501 ntBASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 AGAP7P-201ENST00000582299 2062 ntBASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 AGAP14-201ENST00000624701 2060 ntBASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms