Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA3Q99758 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA3Q99758 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ABCA3Q99758 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ABCA3Q99758 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCA3Q99758 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ABCA3Q99758 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ABCA3Q99758 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCA3Q99758 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCA3Q99758 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ABCA3Q99758 OR2W2P-201ENST00000406313 909 ntBASIC18.92■□□□□ 0.62
ABCA3Q99758 RPL14-203ENST00000416518 812 ntTSL 3 BASIC18.92■□□□□ 0.62
ABCA3Q99758 HNRNPA1P21-201ENST00000424115 961 ntBASIC18.92■□□□□ 0.62
ABCA3Q99758 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ABCA3Q99758 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC18.92■□□□□ 0.62
ABCA3Q99758 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC18.92■□□□□ 0.62
ABCA3Q99758 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ABCA3Q99758 AC092115.1-201ENST00000566277 1402 ntBASIC18.92■□□□□ 0.62
ABCA3Q99758 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCA3Q99758 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.92■□□□□ 0.62
ABCA3Q99758 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ABCA3Q99758 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC18.92■□□□□ 0.62
ABCA3Q99758 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ABCA3Q99758 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.92■□□□□ 0.62
ABCA3Q99758 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCA3Q99758 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.92■□□□□ 0.62
ABCA3Q99758 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ABCA3Q99758 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ABCA3Q99758 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ABCA3Q99758 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
ABCA3Q99758 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA3Q99758 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA3Q99758 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA3Q99758 IGKV1OR-2-201ENST00000457995 350 ntBASIC18.91■□□□□ 0.62
ABCA3Q99758 AC091304.3-201ENST00000566500 716 ntBASIC18.91■□□□□ 0.62
ABCA3Q99758 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC18.91■□□□□ 0.62
ABCA3Q99758 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ABCA3Q99758 KF455155.1-201ENST00000604493 303 ntBASIC18.91■□□□□ 0.62
ABCA3Q99758 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
ABCA3Q99758 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC18.91■□□□□ 0.62
ABCA3Q99758 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA3Q99758 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA3Q99758 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC18.91■□□□□ 0.62
ABCA3Q99758 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC18.91■□□□□ 0.62
ABCA3Q99758 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA3Q99758 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA3Q99758 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.91■□□□□ 0.62
ABCA3Q99758 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ABCA3Q99758 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA3Q99758 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA3Q99758 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.91■□□□□ 0.62
ABCA3Q99758 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA3Q99758 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA3Q99758 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA3Q99758 RPSAP6-201ENST00000417882 882 ntBASIC18.91■□□□□ 0.62
ABCA3Q99758 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC18.91■□□□□ 0.62
ABCA3Q99758 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC18.91■□□□□ 0.62
ABCA3Q99758 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC18.91■□□□□ 0.62
ABCA3Q99758 AC005746.3-201ENST00000614751 393 ntBASIC18.91■□□□□ 0.62
ABCA3Q99758 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA3Q99758 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA3Q99758 AC020931.1-201ENST00000589622 1346 ntBASIC18.9■□□□□ 0.62
ABCA3Q99758 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC18.9■□□□□ 0.62
ABCA3Q99758 AL118508.1-201ENST00000613502 2345 ntBASIC18.9■□□□□ 0.62
ABCA3Q99758 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA3Q99758 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA3Q99758 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA3Q99758 AL050341.2-201ENST00000567508 1541 ntBASIC18.9■□□□□ 0.62
ABCA3Q99758 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA3Q99758 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA3Q99758 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA3Q99758 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA3Q99758 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA3Q99758 DUT-208ENST00000559540 1441 ntTSL 2 BASIC18.9■□□□□ 0.62
ABCA3Q99758 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA3Q99758 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA3Q99758 SNX15-201ENST00000352068 771 ntTSL 5 BASIC18.9■□□□□ 0.62
ABCA3Q99758 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC18.9■□□□□ 0.62
ABCA3Q99758 GULOP-201ENST00000454030 748 ntBASIC18.9■□□□□ 0.62
ABCA3Q99758 CD44-224ENST00000526669 870 ntTSL 5 BASIC18.9■□□□□ 0.62
ABCA3Q99758 AC004801.1-201ENST00000549557 360 ntBASIC18.9■□□□□ 0.62
ABCA3Q99758 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC18.9■□□□□ 0.62
ABCA3Q99758 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC18.9■□□□□ 0.62
ABCA3Q99758 AC005777.1-201ENST00000588332 187 ntBASIC18.9■□□□□ 0.62
ABCA3Q99758 NEK4P3-201ENST00000604859 544 ntBASIC18.9■□□□□ 0.62
ABCA3Q99758 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA3Q99758 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA3Q99758 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.9■□□□□ 0.62
ABCA3Q99758 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC18.9■□□□□ 0.62
ABCA3Q99758 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC18.9■□□□□ 0.62
ABCA3Q99758 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC18.9■□□□□ 0.62
ABCA3Q99758 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.9■□□□□ 0.62
ABCA3Q99758 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA3Q99758 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ABCA3Q99758 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA3Q99758 PRORSD1P-202ENST00000563365 2154 ntBASIC18.9■□□□□ 0.62
ABCA3Q99758 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
ABCA3Q99758 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
ABCA3Q99758 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
ABCA3Q99758 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms