Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 RN7SKP175-201ENST00000408472 289 ntBASIC12.45□□□□□ -0.42
CCL13Q99616 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.45□□□□□ -0.42
CCL13Q99616 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL13Q99616 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.45□□□□□ -0.42
CCL13Q99616 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.45□□□□□ -0.42
CCL13Q99616 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL13Q99616 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CCL13Q99616 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.45□□□□□ -0.42
CCL13Q99616 AP006547.1-201ENST00000563435 692 ntBASIC12.45□□□□□ -0.42
CCL13Q99616 MIR4683-201ENST00000579659 81 ntBASIC12.45□□□□□ -0.42
CCL13Q99616 AC073413.1-201ENST00000603927 732 ntBASIC12.45□□□□□ -0.42
CCL13Q99616 AL008721.1-201ENST00000609964 604 ntBASIC12.45□□□□□ -0.42
CCL13Q99616 AC008687.7-202ENST00000637404 953 ntBASIC12.45□□□□□ -0.42
CCL13Q99616 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL13Q99616 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.45□□□□□ -0.42
CCL13Q99616 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL13Q99616 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CCL13Q99616 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL13Q99616 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL13Q99616 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.45□□□□□ -0.42
CCL13Q99616 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL13Q99616 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL13Q99616 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL13Q99616 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CCL13Q99616 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL13Q99616 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL13Q99616 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL13Q99616 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL13Q99616 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL13Q99616 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL13Q99616 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL13Q99616 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL13Q99616 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CCL13Q99616 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CCL13Q99616 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.44□□□□□ -0.42
CCL13Q99616 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL13Q99616 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL13Q99616 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CCL13Q99616 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.44□□□□□ -0.42
CCL13Q99616 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL13Q99616 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.44□□□□□ -0.42
CCL13Q99616 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL13Q99616 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL13Q99616 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL13Q99616 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.44□□□□□ -0.42
CCL13Q99616 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL13Q99616 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CCL13Q99616 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL13Q99616 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.44□□□□□ -0.42
CCL13Q99616 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.44□□□□□ -0.42
CCL13Q99616 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL13Q99616 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CCL13Q99616 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
CCL13Q99616 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CCL13Q99616 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL13Q99616 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL13Q99616 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL13Q99616 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.44□□□□□ -0.42
CCL13Q99616 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.44□□□□□ -0.42
CCL13Q99616 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL13Q99616 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL13Q99616 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL13Q99616 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL13Q99616 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL13Q99616 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CCL13Q99616 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.44□□□□□ -0.42
CCL13Q99616 AC004945.1-201ENST00000416738 983 ntBASIC12.44□□□□□ -0.42
CCL13Q99616 HOMER2P2-201ENST00000451621 847 ntBASIC12.44□□□□□ -0.42
CCL13Q99616 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.44□□□□□ -0.42
CCL13Q99616 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.44□□□□□ -0.42
CCL13Q99616 PPY2P-201ENST00000582808 702 ntBASIC12.44□□□□□ -0.42
CCL13Q99616 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL13Q99616 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.44□□□□□ -0.42
CCL13Q99616 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL13Q99616 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CCL13Q99616 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.44□□□□□ -0.42
CCL13Q99616 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.44□□□□□ -0.42
CCL13Q99616 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.44□□□□□ -0.42
CCL13Q99616 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CCL13Q99616 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.44□□□□□ -0.42
CCL13Q99616 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.44□□□□□ -0.42
CCL13Q99616 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCL13Q99616 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CCL13Q99616 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.44□□□□□ -0.42
CCL13Q99616 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.44□□□□□ -0.42
CCL13Q99616 AC007292.2-201ENST00000593524 1812 ntBASIC12.44□□□□□ -0.42
CCL13Q99616 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.44□□□□□ -0.42
CCL13Q99616 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCL13Q99616 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.43□□□□□ -0.42
CCL13Q99616 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.43□□□□□ -0.42
CCL13Q99616 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.43□□□□□ -0.42
CCL13Q99616 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.43□□□□□ -0.42
CCL13Q99616 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CCL13Q99616 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.43□□□□□ -0.42
CCL13Q99616 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
CCL13Q99616 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCL13Q99616 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms