Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CDK5RAP2Q96SN8 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDK5RAP2Q96SN8 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.02■□□□□ 0.32
CDK5RAP2Q96SN8 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC17.02■□□□□ 0.32
CDK5RAP2Q96SN8 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC17.02■□□□□ 0.32
CDK5RAP2Q96SN8 AC005740.1-201ENST00000515639 522 ntBASIC17.02■□□□□ 0.32
CDK5RAP2Q96SN8 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC17.02■□□□□ 0.32
CDK5RAP2Q96SN8 AP002803.1-201ENST00000528836 498 ntBASIC17.02■□□□□ 0.32
CDK5RAP2Q96SN8 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC17.02■□□□□ 0.32
CDK5RAP2Q96SN8 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC17.02■□□□□ 0.32
CDK5RAP2Q96SN8 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC17.02■□□□□ 0.32
CDK5RAP2Q96SN8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDK5RAP2Q96SN8 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDK5RAP2Q96SN8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDK5RAP2Q96SN8 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDK5RAP2Q96SN8 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDK5RAP2Q96SN8 KRT8P43-201ENST00000406052 1458 ntBASIC17.02■□□□□ 0.31
CDK5RAP2Q96SN8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDK5RAP2Q96SN8 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDK5RAP2Q96SN8 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDK5RAP2Q96SN8 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDK5RAP2Q96SN8 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDK5RAP2Q96SN8 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 AC095040.1-201ENST00000513286 675 ntBASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 AC138701.2-201ENST00000553634 226 ntBASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 BX640514.1-201ENST00000583223 1918 ntBASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 IL9RP3-201ENST00000442856 1674 ntBASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 AL357563.1-201ENST00000404728 395 ntBASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 DUX4L50-201ENST00000455245 715 ntBASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDK5RAP2Q96SN8 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 API5-208ENST00000531273 1868 ntTSL 2 BASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 USP17L6P-201ENST00000382470 1197 ntBASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 MIR3147-201ENST00000577811 66 ntBASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 LINC00552-201ENST00000625151 2579 ntBASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP2Q96SN8 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CDK5RAP2Q96SN8 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms