Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
SUSD3Q96L08 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
SUSD3Q96L08 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.55■□□□□ 0.08
SUSD3Q96L08 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.55■□□□□ 0.08
SUSD3Q96L08 MEG3_2.1-201ENST00000611456 105 ntBASIC15.55■□□□□ 0.08
SUSD3Q96L08 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC15.55■□□□□ 0.08
SUSD3Q96L08 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SUSD3Q96L08 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.55■□□□□ 0.08
SUSD3Q96L08 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SUSD3Q96L08 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SUSD3Q96L08 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SUSD3Q96L08 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SUSD3Q96L08 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.55■□□□□ 0.08
SUSD3Q96L08 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.55■□□□□ 0.08
SUSD3Q96L08 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SUSD3Q96L08 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SUSD3Q96L08 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.54■□□□□ 0.08
SUSD3Q96L08 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
SUSD3Q96L08 LINC01165-201ENST00000445190 1623 ntBASIC15.54■□□□□ 0.08
SUSD3Q96L08 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SUSD3Q96L08 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SUSD3Q96L08 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
SUSD3Q96L08 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.54■□□□□ 0.08
SUSD3Q96L08 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SUSD3Q96L08 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SUSD3Q96L08 FGD5P1-202ENST00000614866 2498 ntBASIC15.54■□□□□ 0.08
SUSD3Q96L08 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SUSD3Q96L08 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SUSD3Q96L08 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SUSD3Q96L08 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SUSD3Q96L08 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.54■□□□□ 0.08
SUSD3Q96L08 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.54■□□□□ 0.08
SUSD3Q96L08 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SUSD3Q96L08 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SUSD3Q96L08 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.54■□□□□ 0.08
SUSD3Q96L08 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.54■□□□□ 0.08
SUSD3Q96L08 AC234782.1-201ENST00000451950 919 ntBASIC15.54■□□□□ 0.08
SUSD3Q96L08 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.54■□□□□ 0.08
SUSD3Q96L08 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.54■□□□□ 0.08
SUSD3Q96L08 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.54■□□□□ 0.08
SUSD3Q96L08 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.54■□□□□ 0.08
SUSD3Q96L08 AC124068.2-201ENST00000569473 1109 ntBASIC15.54■□□□□ 0.08
SUSD3Q96L08 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.54■□□□□ 0.08
SUSD3Q96L08 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.54■□□□□ 0.08
SUSD3Q96L08 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.54■□□□□ 0.08
SUSD3Q96L08 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.54■□□□□ 0.08
SUSD3Q96L08 AC006453.1-201ENST00000636037 1257 ntBASIC15.54■□□□□ 0.08
SUSD3Q96L08 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SUSD3Q96L08 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SUSD3Q96L08 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SUSD3Q96L08 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SUSD3Q96L08 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SUSD3Q96L08 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.54■□□□□ 0.08
SUSD3Q96L08 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SUSD3Q96L08 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SUSD3Q96L08 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SUSD3Q96L08 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SUSD3Q96L08 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.54■□□□□ 0.08
SUSD3Q96L08 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SUSD3Q96L08 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SUSD3Q96L08 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.54■□□□□ 0.08
SUSD3Q96L08 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SUSD3Q96L08 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.53■□□□□ 0.08
SUSD3Q96L08 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SUSD3Q96L08 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.53■□□□□ 0.08
SUSD3Q96L08 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.53■□□□□ 0.08
SUSD3Q96L08 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SUSD3Q96L08 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SUSD3Q96L08 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
SUSD3Q96L08 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.53■□□□□ 0.08
SUSD3Q96L08 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SUSD3Q96L08 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SUSD3Q96L08 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SUSD3Q96L08 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SUSD3Q96L08 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
SUSD3Q96L08 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SUSD3Q96L08 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SUSD3Q96L08 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.53■□□□□ 0.08
SUSD3Q96L08 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.53■□□□□ 0.08
SUSD3Q96L08 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.53■□□□□ 0.08
SUSD3Q96L08 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SUSD3Q96L08 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.53■□□□□ 0.08
SUSD3Q96L08 FRMPD2B-201ENST00000431305 1347 ntBASIC15.53■□□□□ 0.08
SUSD3Q96L08 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.53■□□□□ 0.08
SUSD3Q96L08 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SUSD3Q96L08 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
SUSD3Q96L08 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SUSD3Q96L08 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SUSD3Q96L08 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.53■□□□□ 0.08
SUSD3Q96L08 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
SUSD3Q96L08 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SUSD3Q96L08 AC092506.1-202ENST00000401022 528 ntBASIC15.53■□□□□ 0.08
SUSD3Q96L08 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.53■□□□□ 0.08
SUSD3Q96L08 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.53■□□□□ 0.08
SUSD3Q96L08 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.53■□□□□ 0.08
SUSD3Q96L08 RN7SL258P-201ENST00000478664 300 ntBASIC15.53■□□□□ 0.08
SUSD3Q96L08 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SUSD3Q96L08 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.53■□□□□ 0.08
SUSD3Q96L08 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.53■□□□□ 0.08
SUSD3Q96L08 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms