Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX11Q96FC9 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX11Q96FC9 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX11Q96FC9 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
DDX11Q96FC9 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX11Q96FC9 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DDX11Q96FC9 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX11Q96FC9 AC113367.3-201ENST00000508316 1912 ntBASIC17.66■□□□□ 0.42
DDX11Q96FC9 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
DDX11Q96FC9 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.66■□□□□ 0.42
DDX11Q96FC9 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX11Q96FC9 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.66■□□□□ 0.42
DDX11Q96FC9 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DDX11Q96FC9 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX11Q96FC9 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
DDX11Q96FC9 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX11Q96FC9 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX11Q96FC9 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.66■□□□□ 0.42
DDX11Q96FC9 MIR326-201ENST00000362220 95 ntBASIC17.66■□□□□ 0.42
DDX11Q96FC9 RNU1-114P-201ENST00000365297 166 ntBASIC17.66■□□□□ 0.42
DDX11Q96FC9 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX11Q96FC9 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
DDX11Q96FC9 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
DDX11Q96FC9 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX11Q96FC9 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DDX11Q96FC9 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.66■□□□□ 0.42
DDX11Q96FC9 BCYRN1-201ENST00000418539 200 ntBASIC17.66■□□□□ 0.42
DDX11Q96FC9 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.66■□□□□ 0.42
DDX11Q96FC9 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX11Q96FC9 RNA5SP486-201ENST00000515961 83 ntBASIC17.66■□□□□ 0.42
DDX11Q96FC9 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
DDX11Q96FC9 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.66■□□□□ 0.42
DDX11Q96FC9 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.66■□□□□ 0.42
DDX11Q96FC9 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.66■□□□□ 0.42
DDX11Q96FC9 AL138709.1-201ENST00000614840 1693 ntBASIC17.66■□□□□ 0.42
DDX11Q96FC9 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.66■□□□□ 0.42
DDX11Q96FC9 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX11Q96FC9 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DDX11Q96FC9 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX11Q96FC9 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.66■□□□□ 0.42
DDX11Q96FC9 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
DDX11Q96FC9 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX11Q96FC9 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
DDX11Q96FC9 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.66■□□□□ 0.42
DDX11Q96FC9 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
DDX11Q96FC9 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX11Q96FC9 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DDX11Q96FC9 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
DDX11Q96FC9 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX11Q96FC9 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX11Q96FC9 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDX11Q96FC9 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX11Q96FC9 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDX11Q96FC9 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDX11Q96FC9 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX11Q96FC9 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDX11Q96FC9 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 AC114812.1-204ENST00000449669 728 ntBASIC17.65■□□□□ 0.42
DDX11Q96FC9 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX11Q96FC9 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDX11Q96FC9 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX11Q96FC9 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDX11Q96FC9 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDX11Q96FC9 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX11Q96FC9 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX11Q96FC9 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DDX11Q96FC9 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX11Q96FC9 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX11Q96FC9 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX11Q96FC9 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX11Q96FC9 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX11Q96FC9 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
DDX11Q96FC9 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX11Q96FC9 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DDX11Q96FC9 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms