Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 SPDYE19P-201ENST00000338590 713 ntBASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 MEP1AP4-201ENST00000423244 1087 ntBASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 AC023310.3-201ENST00000557027 670 ntBASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 AC100756.1-201ENST00000562736 682 ntBASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 RARRES2P5-201ENST00000564013 466 ntBASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 AC138749.3-201ENST00000567691 622 ntBASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 AC116165.1-201ENST00000611806 668 ntBASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RTN4IP1Q8WWV3 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 CLK3P2-201ENST00000427566 1453 ntBASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 UGT1A2P-201ENST00000454886 866 ntBASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 AC004790.1-201ENST00000612686 536 ntBASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.55□□□□□ -0.4
RTN4IP1Q8WWV3 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms