Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 AC092903.1-201ENST00000466506 262 ntBASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC9.62□□□□□ -0.87
ALMS1Q8TCU4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 RN7SL605P-201ENST00000577229 281 ntBASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 AL359091.4-201ENST00000610052 409 ntBASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 NEK4P3-201ENST00000604859 544 ntBASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 CCT8L1P-201ENST00000465400 1674 ntBASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 AIG1-203ENST00000367596 559 ntTSL 2 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 ACY3-202ENST00000529256 933 ntTSL 3 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 ABCC6P1-203ENST00000565566 1170 ntBASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 AC104506.1-201ENST00000609247 429 ntBASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 AP006248.1-201ENST00000610471 67 ntBASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
ALMS1Q8TCU4 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 KRT8P6-201ENST00000399259 1207 ntBASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 VDAC1P11-201ENST00000458323 852 ntBASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 URAHP-205ENST00000610227 398 ntBASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
ALMS1Q8TCU4 OLA1P2-201ENST00000395519 1264 ntBASIC9.6□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms