Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 IFT20-206ENST00000578122 834 ntTSL 2 BASIC22.2■■□□□ 1.14
CCER1Q8TC90 IFT20-208ENST00000578985 831 ntTSL 3 BASIC22.2■■□□□ 1.14
CCER1Q8TC90 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC22.2■■□□□ 1.14
CCER1Q8TC90 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC22.2■■□□□ 1.14
CCER1Q8TC90 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC22.2■■□□□ 1.14
CCER1Q8TC90 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC22.2■■□□□ 1.14
CCER1Q8TC90 HFE2-206ENST00000634927 506 ntTSL 4 BASIC22.2■■□□□ 1.14
CCER1Q8TC90 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC22.2■■□□□ 1.14
CCER1Q8TC90 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCER1Q8TC90 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCER1Q8TC90 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CCER1Q8TC90 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CCER1Q8TC90 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CCER1Q8TC90 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CCER1Q8TC90 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCER1Q8TC90 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CCER1Q8TC90 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCER1Q8TC90 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCER1Q8TC90 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCER1Q8TC90 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCER1Q8TC90 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCER1Q8TC90 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCER1Q8TC90 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCER1Q8TC90 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCER1Q8TC90 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CCER1Q8TC90 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCER1Q8TC90 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC22.19■■□□□ 1.14
CCER1Q8TC90 AC093214.1-201ENST00000511688 1107 ntBASIC22.19■■□□□ 1.14
CCER1Q8TC90 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC22.19■■□□□ 1.14
CCER1Q8TC90 RRP7BP-205ENST00000566851 833 ntBASIC22.19■■□□□ 1.14
CCER1Q8TC90 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC22.19■■□□□ 1.14
CCER1Q8TC90 WDR88-203ENST00000592765 651 ntTSL 5 BASIC22.19■■□□□ 1.14
CCER1Q8TC90 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
CCER1Q8TC90 KRT8P22-201ENST00000562317 1415 ntBASIC22.19■■□□□ 1.14
CCER1Q8TC90 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
CCER1Q8TC90 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
CCER1Q8TC90 RN7SL832P-201ENST00000607781 1756 ntBASIC22.19■■□□□ 1.14
CCER1Q8TC90 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCER1Q8TC90 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
CCER1Q8TC90 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCER1Q8TC90 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CCER1Q8TC90 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCER1Q8TC90 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
CCER1Q8TC90 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
CCER1Q8TC90 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC22.19■■□□□ 1.14
CCER1Q8TC90 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CCER1Q8TC90 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCER1Q8TC90 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCER1Q8TC90 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC22.18■■□□□ 1.14
CCER1Q8TC90 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCER1Q8TC90 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC22.18■■□□□ 1.14
CCER1Q8TC90 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCER1Q8TC90 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCER1Q8TC90 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCER1Q8TC90 GOLGA8VP-201ENST00000559009 1798 ntBASIC22.18■■□□□ 1.14
CCER1Q8TC90 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC22.18■■□□□ 1.14
CCER1Q8TC90 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCER1Q8TC90 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CCER1Q8TC90 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCER1Q8TC90 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCER1Q8TC90 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CCER1Q8TC90 MEP1AP4-201ENST00000423244 1087 ntBASIC22.18■■□□□ 1.14
CCER1Q8TC90 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC22.18■■□□□ 1.14
CCER1Q8TC90 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC22.18■■□□□ 1.14
CCER1Q8TC90 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC22.18■■□□□ 1.14
CCER1Q8TC90 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CCER1Q8TC90 AL359711.2-201ENST00000563105 872 ntBASIC22.18■■□□□ 1.14
CCER1Q8TC90 AC124283.3-201ENST00000570869 594 ntBASIC22.18■■□□□ 1.14
CCER1Q8TC90 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCER1Q8TC90 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCER1Q8TC90 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCER1Q8TC90 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
CCER1Q8TC90 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCER1Q8TC90 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCER1Q8TC90 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCER1Q8TC90 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC22.18■■□□□ 1.14
CCER1Q8TC90 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
CCER1Q8TC90 MYADML-201ENST00000474610 2147 ntBASIC22.18■■□□□ 1.14
CCER1Q8TC90 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCER1Q8TC90 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCER1Q8TC90 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCER1Q8TC90 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC22.17■■□□□ 1.14
CCER1Q8TC90 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCER1Q8TC90 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CCER1Q8TC90 AC003102.2-201ENST00000589195 1469 ntBASIC22.17■■□□□ 1.14
CCER1Q8TC90 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
CCER1Q8TC90 AL136172.1-201ENST00000598590 1394 ntBASIC22.17■■□□□ 1.14
CCER1Q8TC90 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC22.17■■□□□ 1.14
CCER1Q8TC90 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCER1Q8TC90 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC22.17■■□□□ 1.14
CCER1Q8TC90 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
CCER1Q8TC90 RPS15-201ENST00000233609 534 ntTSL 2 BASIC22.17■■□□□ 1.14
CCER1Q8TC90 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCER1Q8TC90 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC22.17■■□□□ 1.14
CCER1Q8TC90 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC22.17■■□□□ 1.14
CCER1Q8TC90 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC22.17■■□□□ 1.14
CCER1Q8TC90 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CCER1Q8TC90 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCER1Q8TC90 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CCER1Q8TC90 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms