Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 PUDPP3-201ENST00000445368 636 ntBASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 AC125604.1-201ENST00000496255 707 ntBASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 AL160314.3-201ENST00000556041 767 ntBASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 AC023024.2-201ENST00000623561 1993 ntBASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 AC244394.1-201ENST00000435000 1665 ntBASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHKBP1Q8TBC3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 REXO1L2P-201ENST00000425429 2069 ntBASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 AGAP7P-201ENST00000582299 2062 ntBASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 AGAP14-201ENST00000624701 2060 ntBASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 FAM58BP-201ENST00000439056 645 ntBASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 AC012618.1-201ENST00000461223 412 ntBASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 SNORD3B-2-202ENST00000571722 791 ntBASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 AC008825.2-201ENST00000603374 718 ntBASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 AC023090.2-201ENST00000625182 2110 ntBASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHKBP1Q8TBC3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms