Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 CICP16-201ENST00000502609 2813 ntBASIC14.5□□□□□ -0.09
HIPK4Q8NE63 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 AP000344.2-201ENST00000512987 629 ntBASIC14.5□□□□□ -0.09
HIPK4Q8NE63 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 AC026150.2-201ENST00000564693 1156 ntBASIC14.5□□□□□ -0.09
HIPK4Q8NE63 AC015910.1-201ENST00000579400 975 ntBASIC14.5□□□□□ -0.09
HIPK4Q8NE63 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 AL354702.1-201ENST00000442006 1960 ntBASIC14.5□□□□□ -0.09
HIPK4Q8NE63 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
HIPK4Q8NE63 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.49□□□□□ -0.09
HIPK4Q8NE63 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 AL079307.3-201ENST00000556114 283 ntBASIC14.49□□□□□ -0.09
HIPK4Q8NE63 MIR4469-201ENST00000583919 79 ntBASIC14.49□□□□□ -0.09
HIPK4Q8NE63 AC004835.2-201ENST00000603762 682 ntBASIC14.49□□□□□ -0.09
HIPK4Q8NE63 MIR6069-201ENST00000620069 79 ntBASIC14.49□□□□□ -0.09
HIPK4Q8NE63 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 AC083964.2-201ENST00000623988 2396 ntBASIC14.49□□□□□ -0.09
HIPK4Q8NE63 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.49□□□□□ -0.09
HIPK4Q8NE63 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.49□□□□□ -0.09
HIPK4Q8NE63 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms