Protein–RNA interactions for Protein: Q8N3J3

C17orf53, Uncharacterized protein C17orf53, humanhuman

Predicted RBP Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C17orf53Q8N3J3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 AL031284.1-201ENST00000419297 478 ntBASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 AC079781.3-201ENST00000449110 356 ntBASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
C17orf53Q8N3J3 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 ADH5P3-201ENST00000433842 1137 ntBASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 LINC01115-203ENST00000606068 577 ntBASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C17orf53Q8N3J3 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
C17orf53Q8N3J3 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC16.18■□□□□ 0.18
C17orf53Q8N3J3 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C17orf53Q8N3J3 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C17orf53Q8N3J3 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
C17orf53Q8N3J3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C17orf53Q8N3J3 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC16.18■□□□□ 0.18
C17orf53Q8N3J3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
C17orf53Q8N3J3 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC16.18■□□□□ 0.18
C17orf53Q8N3J3 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC16.18■□□□□ 0.18
C17orf53Q8N3J3 AC106818.1-201ENST00000623223 3242 ntBASIC16.18■□□□□ 0.18
C17orf53Q8N3J3 TP73-207ENST00000378290 1831 ntTSL 2 BASIC16.18■□□□□ 0.18
C17orf53Q8N3J3 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms