Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SIX5Q8N196 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
SIX5Q8N196 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.22■□□□□ 0.03
SIX5Q8N196 RPL17P45-201ENST00000586289 509 ntBASIC15.22■□□□□ 0.03
SIX5Q8N196 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC15.22■□□□□ 0.03
SIX5Q8N196 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.22■□□□□ 0.03
SIX5Q8N196 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.22■□□□□ 0.03
SIX5Q8N196 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.22■□□□□ 0.03
SIX5Q8N196 LINC01783-202ENST00000614408 828 ntBASIC15.22■□□□□ 0.03
SIX5Q8N196 BX284668.2-205ENST00000619677 828 ntBASIC15.22■□□□□ 0.03
SIX5Q8N196 AL161773.1-201ENST00000624845 863 ntBASIC15.22■□□□□ 0.03
SIX5Q8N196 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SIX5Q8N196 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX5Q8N196 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX5Q8N196 AC092364.2-201ENST00000596710 2692 ntBASIC15.22■□□□□ 0.03
SIX5Q8N196 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX5Q8N196 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SIX5Q8N196 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX5Q8N196 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.22■□□□□ 0.03
SIX5Q8N196 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.22■□□□□ 0.03
SIX5Q8N196 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SIX5Q8N196 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SIX5Q8N196 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SIX5Q8N196 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SIX5Q8N196 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.22■□□□□ 0.03
SIX5Q8N196 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.22■□□□□ 0.03
SIX5Q8N196 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX5Q8N196 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX5Q8N196 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.21■□□□□ 0.03
SIX5Q8N196 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SIX5Q8N196 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIX5Q8N196 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIX5Q8N196 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
SIX5Q8N196 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIX5Q8N196 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SIX5Q8N196 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIX5Q8N196 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIX5Q8N196 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SIX5Q8N196 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIX5Q8N196 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIX5Q8N196 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.21■□□□□ 0.03
SIX5Q8N196 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
SIX5Q8N196 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15.21■□□□□ 0.03
SIX5Q8N196 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIX5Q8N196 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SIX5Q8N196 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIX5Q8N196 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIX5Q8N196 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIX5Q8N196 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.21■□□□□ 0.03
SIX5Q8N196 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.21■□□□□ 0.03
SIX5Q8N196 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIX5Q8N196 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIX5Q8N196 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.21■□□□□ 0.03
SIX5Q8N196 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC15.21■□□□□ 0.03
SIX5Q8N196 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SIX5Q8N196 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC15.21■□□□□ 0.03
SIX5Q8N196 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.21■□□□□ 0.03
SIX5Q8N196 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC15.21■□□□□ 0.03
SIX5Q8N196 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.21■□□□□ 0.03
SIX5Q8N196 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.21■□□□□ 0.03
SIX5Q8N196 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC15.21■□□□□ 0.03
SIX5Q8N196 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC15.21■□□□□ 0.03
SIX5Q8N196 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.21■□□□□ 0.03
SIX5Q8N196 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIX5Q8N196 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.21■□□□□ 0.03
SIX5Q8N196 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SIX5Q8N196 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SIX5Q8N196 AL157813.1-201ENST00000612996 587 ntBASIC15.21■□□□□ 0.03
SIX5Q8N196 MIR6858-201ENST00000620733 67 ntBASIC15.21■□□□□ 0.03
SIX5Q8N196 AL132780.4-201ENST00000624870 1135 ntBASIC15.21■□□□□ 0.03
SIX5Q8N196 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC15.21■□□□□ 0.03
SIX5Q8N196 Z98259.2-201ENST00000641583 609 ntBASIC15.21■□□□□ 0.03
SIX5Q8N196 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SIX5Q8N196 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SIX5Q8N196 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.21■□□□□ 0.03
SIX5Q8N196 AC006058.4-201ENST00000624016 1670 ntBASIC15.21■□□□□ 0.03
SIX5Q8N196 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.21■□□□□ 0.03
SIX5Q8N196 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SIX5Q8N196 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIX5Q8N196 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SIX5Q8N196 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SIX5Q8N196 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.21■□□□□ 0.02
SIX5Q8N196 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SIX5Q8N196 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SIX5Q8N196 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.21■□□□□ 0.02
SIX5Q8N196 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
SIX5Q8N196 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIX5Q8N196 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.2■□□□□ 0.02
SIX5Q8N196 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.2■□□□□ 0.02
SIX5Q8N196 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIX5Q8N196 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SIX5Q8N196 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SIX5Q8N196 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIX5Q8N196 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC15.2■□□□□ 0.02
SIX5Q8N196 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.2■□□□□ 0.02
SIX5Q8N196 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIX5Q8N196 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIX5Q8N196 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIX5Q8N196 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIX5Q8N196 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms