Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.8□□□□□ -0.04
NUDCD3Q8IVD9 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 AL138799.1-201ENST00000448213 1675 ntBASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 PPT1-213ENST00000641319 2388 ntBASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NUDCD3Q8IVD9 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 AL359183.1-201ENST00000623796 2132 ntBASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 AC011840.2-201ENST00000563063 1520 ntBASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 AC015818.8-201ENST00000587907 1519 ntBASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 DRD5P1-201ENST00000456605 1438 ntBASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 CICP20-201ENST00000443330 2801 ntBASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 AL121894.2-201ENST00000602977 491 ntBASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 AL158212.4-201ENST00000624062 1286 ntBASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NUDCD3Q8IVD9 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NUDCD3Q8IVD9 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NUDCD3Q8IVD9 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.77□□□□□ -0.04
NUDCD3Q8IVD9 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.77□□□□□ -0.04
NUDCD3Q8IVD9 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NUDCD3Q8IVD9 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NUDCD3Q8IVD9 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NUDCD3Q8IVD9 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NUDCD3Q8IVD9 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
NUDCD3Q8IVD9 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
NUDCD3Q8IVD9 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NUDCD3Q8IVD9 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.77□□□□□ -0.04
NUDCD3Q8IVD9 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NUDCD3Q8IVD9 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
NUDCD3Q8IVD9 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NUDCD3Q8IVD9 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NUDCD3Q8IVD9 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
NUDCD3Q8IVD9 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms