Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 MIR658-201ENST00000385210 100 ntBASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 SERBP1P3-201ENST00000459980 809 ntBASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 AC093004.1-201ENST00000508850 424 ntBASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 RAB43P1-201ENST00000561790 589 ntBASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 AP000845.1-201ENST00000581677 2131 ntBASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXR1Q6PIV2 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 TPRX2P-201ENST00000535362 881 ntBASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 AC024267.1-201ENST00000582320 895 ntBASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 AC004790.1-201ENST00000612686 536 ntBASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
FOXR1Q6PIV2 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms