Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 HINT1-205ENST00000508488 703 ntTSL 2 BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 SRP14-204ENST00000558720 780 ntTSL 2 BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 AC011498.7-201ENST00000624986 2027 ntBASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 AC092573.1-201ENST00000433054 884 ntBASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 RN7SL582P-201ENST00000491078 279 ntBASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 AC012158.2-201ENST00000536546 354 ntBASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 GOLGA8UP-201ENST00000527159 1755 ntBASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 USP39-220ENST00000613444 2161 ntTSL 2 BASIC21.66■■□□□ 1.06
CDC42BPAQ5VT25 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC21.65■■□□□ 1.06
CDC42BPAQ5VT25 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42BPAQ5VT25 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42BPAQ5VT25 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42BPAQ5VT25 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC21.65■■□□□ 1.06
CDC42BPAQ5VT25 AC106827.1-201ENST00000366454 431 ntBASIC21.65■■□□□ 1.06
CDC42BPAQ5VT25 DDX39AP1-201ENST00000445147 1181 ntBASIC21.65■■□□□ 1.06
CDC42BPAQ5VT25 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CDC42BPAQ5VT25 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42BPAQ5VT25 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC21.65■■□□□ 1.06
CDC42BPAQ5VT25 AC092862.1-201ENST00000541534 533 ntBASIC21.65■■□□□ 1.06
CDC42BPAQ5VT25 GAS7-216ENST00000583882 553 ntTSL 5 BASIC21.65■■□□□ 1.06
CDC42BPAQ5VT25 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42BPAQ5VT25 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42BPAQ5VT25 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42BPAQ5VT25 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42BPAQ5VT25 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC21.65■■□□□ 1.06
CDC42BPAQ5VT25 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42BPAQ5VT25 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.65■■□□□ 1.06
CDC42BPAQ5VT25 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42BPAQ5VT25 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42BPAQ5VT25 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42BPAQ5VT25 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC21.65■■□□□ 1.06
CDC42BPAQ5VT25 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC21.64■■□□□ 1.06
CDC42BPAQ5VT25 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDC42BPAQ5VT25 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CDC42BPAQ5VT25 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC21.64■■□□□ 1.06
CDC42BPAQ5VT25 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC21.64■■□□□ 1.06
CDC42BPAQ5VT25 FAM86B3P-203ENST00000523992 854 ntBASIC21.64■■□□□ 1.06
CDC42BPAQ5VT25 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CDC42BPAQ5VT25 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC21.64■■□□□ 1.06
CDC42BPAQ5VT25 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC21.64■■□□□ 1.06
CDC42BPAQ5VT25 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC21.64■■□□□ 1.05
CDC42BPAQ5VT25 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC21.64■■□□□ 1.05
CDC42BPAQ5VT25 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDC42BPAQ5VT25 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDC42BPAQ5VT25 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CDC42BPAQ5VT25 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDC42BPAQ5VT25 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDC42BPAQ5VT25 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDC42BPAQ5VT25 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC21.64■■□□□ 1.05
CDC42BPAQ5VT25 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDC42BPAQ5VT25 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDC42BPAQ5VT25 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDC42BPAQ5VT25 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDC42BPAQ5VT25 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDC42BPAQ5VT25 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 FAU-202ENST00000434372 533 ntTSL 2 BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 TPT1P11-201ENST00000458482 498 ntBASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 DLK1-205ENST00000556051 469 ntTSL 2 BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPAQ5VT25 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms