Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 AC004461.1-201ENST00000412461 403 ntBASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 KRT18P32-201ENST00000424695 1287 ntBASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 AC023141.5-201ENST00000458585 616 ntBASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 ALG1L8P-201ENST00000533887 760 ntBASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 AC025678.2-201ENST00000562061 970 ntBASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 AC025048.3-201ENST00000590609 569 ntBASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 LINC01115-203ENST00000606068 577 ntBASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 AC003101.2-201ENST00000612557 442 ntBASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 AC005702.4-201ENST00000618393 416 ntBASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 LINC00628-201ENST00000628516 1289 ntBASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.38□□□□□ -0.43
ANKRD55Q3KP44 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 AC004066.1-201ENST00000502488 802 ntBASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 AC004449.1-201ENST00000564240 433 ntBASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ANKRD55Q3KP44 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ANKRD55Q3KP44 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms