Protein–RNA interactions for Protein: Q05655

PRKCD, Protein kinase C delta type, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCDQ05655 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
PRKCDQ05655 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PRKCDQ05655 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PRKCDQ05655 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PRKCDQ05655 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PRKCDQ05655 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PRKCDQ05655 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.73□□□□□ -0.21
PRKCDQ05655 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PRKCDQ05655 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PRKCDQ05655 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.73□□□□□ -0.21
PRKCDQ05655 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.73□□□□□ -0.21
PRKCDQ05655 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PRKCDQ05655 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PRKCDQ05655 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
PRKCDQ05655 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
PRKCDQ05655 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.72□□□□□ -0.21
PRKCDQ05655 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.72□□□□□ -0.21
PRKCDQ05655 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
PRKCDQ05655 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
PRKCDQ05655 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.72□□□□□ -0.21
PRKCDQ05655 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
PRKCDQ05655 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
PRKCDQ05655 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.72□□□□□ -0.21
PRKCDQ05655 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.72□□□□□ -0.21
PRKCDQ05655 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.72□□□□□ -0.21
PRKCDQ05655 METTL21AP1-201ENST00000438852 635 ntBASIC13.72□□□□□ -0.21
PRKCDQ05655 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.72□□□□□ -0.21
PRKCDQ05655 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.72□□□□□ -0.21
PRKCDQ05655 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.72□□□□□ -0.21
PRKCDQ05655 AC023310.3-201ENST00000557027 670 ntBASIC13.72□□□□□ -0.21
PRKCDQ05655 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.72□□□□□ -0.21
PRKCDQ05655 AC100756.1-201ENST00000562736 682 ntBASIC13.72□□□□□ -0.21
PRKCDQ05655 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.72□□□□□ -0.21
PRKCDQ05655 AC104794.3-201ENST00000566840 1248 ntBASIC13.72□□□□□ -0.21
PRKCDQ05655 AC138749.3-201ENST00000567691 622 ntBASIC13.72□□□□□ -0.21
PRKCDQ05655 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.72□□□□□ -0.21
PRKCDQ05655 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
PRKCDQ05655 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.72□□□□□ -0.21
PRKCDQ05655 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.72□□□□□ -0.21
PRKCDQ05655 AC116165.1-201ENST00000611806 668 ntBASIC13.72□□□□□ -0.21
PRKCDQ05655 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.72□□□□□ -0.21
PRKCDQ05655 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
PRKCDQ05655 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.72□□□□□ -0.21
PRKCDQ05655 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
PRKCDQ05655 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.72□□□□□ -0.21
PRKCDQ05655 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.72□□□□□ -0.21
PRKCDQ05655 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.72□□□□□ -0.21
PRKCDQ05655 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
PRKCDQ05655 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.72□□□□□ -0.21
PRKCDQ05655 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.72□□□□□ -0.21
PRKCDQ05655 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRKCDQ05655 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.72□□□□□ -0.21
PRKCDQ05655 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.71□□□□□ -0.21
PRKCDQ05655 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCDQ05655 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCDQ05655 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.71□□□□□ -0.21
PRKCDQ05655 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCDQ05655 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
PRKCDQ05655 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCDQ05655 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCDQ05655 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.71□□□□□ -0.21
PRKCDQ05655 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCDQ05655 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCDQ05655 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCDQ05655 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCDQ05655 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCDQ05655 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.71□□□□□ -0.21
PRKCDQ05655 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.71□□□□□ -0.21
PRKCDQ05655 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.71□□□□□ -0.21
PRKCDQ05655 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCDQ05655 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCDQ05655 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PRKCDQ05655 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms