Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.27□□□□□ -0.29
H3F3AP84243 ATP5G2P4-201ENST00000442175 420 ntBASIC13.27□□□□□ -0.29
H3F3AP84243 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.27□□□□□ -0.29
H3F3AP84243 KRT223P-202ENST00000449164 1292 ntBASIC13.27□□□□□ -0.29
H3F3AP84243 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
H3F3AP84243 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.27□□□□□ -0.29
H3F3AP84243 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.27□□□□□ -0.29
H3F3AP84243 MIR4683-201ENST00000579659 81 ntBASIC13.27□□□□□ -0.29
H3F3AP84243 AL358472.3-201ENST00000608147 415 ntBASIC13.27□□□□□ -0.29
H3F3AP84243 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3AP84243 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.27□□□□□ -0.29
H3F3AP84243 AC002472.3-201ENST00000640124 621 ntBASIC13.27□□□□□ -0.29
H3F3AP84243 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.27□□□□□ -0.29
H3F3AP84243 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
H3F3AP84243 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
H3F3AP84243 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3AP84243 AL136172.1-201ENST00000598590 1394 ntBASIC13.27□□□□□ -0.29
H3F3AP84243 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.27□□□□□ -0.29
H3F3AP84243 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3AP84243 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3AP84243 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3AP84243 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3AP84243 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3AP84243 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3AP84243 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3AP84243 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3AP84243 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3AP84243 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3AP84243 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
H3F3AP84243 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
H3F3AP84243 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
H3F3AP84243 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.26□□□□□ -0.29
H3F3AP84243 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 MIR658-201ENST00000385210 100 ntBASIC13.26□□□□□ -0.29
H3F3AP84243 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.26□□□□□ -0.29
H3F3AP84243 PUDPP3-201ENST00000445368 636 ntBASIC13.26□□□□□ -0.29
H3F3AP84243 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 HOMER2P2-201ENST00000451621 847 ntBASIC13.26□□□□□ -0.29
H3F3AP84243 TPT1P11-201ENST00000458482 498 ntBASIC13.26□□□□□ -0.29
H3F3AP84243 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.26□□□□□ -0.29
H3F3AP84243 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.26□□□□□ -0.29
H3F3AP84243 KRT8P4-201ENST00000509735 1454 ntBASIC13.26□□□□□ -0.29
H3F3AP84243 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 RNA5SP412-201ENST00000516234 123 ntBASIC13.26□□□□□ -0.29
H3F3AP84243 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.26□□□□□ -0.29
H3F3AP84243 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.26□□□□□ -0.29
H3F3AP84243 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.26□□□□□ -0.29
H3F3AP84243 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.26□□□□□ -0.29
H3F3AP84243 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.26□□□□□ -0.29
H3F3AP84243 AC103988.2-201ENST00000561804 725 ntBASIC13.26□□□□□ -0.29
H3F3AP84243 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.26□□□□□ -0.29
H3F3AP84243 PPY2P-201ENST00000582808 702 ntBASIC13.26□□□□□ -0.29
H3F3AP84243 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.26□□□□□ -0.29
H3F3AP84243 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.26□□□□□ -0.29
H3F3AP84243 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.26□□□□□ -0.29
H3F3AP84243 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
H3F3AP84243 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.26□□□□□ -0.29
H3F3AP84243 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
H3F3AP84243 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
H3F3AP84243 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3AP84243 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
H3F3AP84243 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3AP84243 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.25□□□□□ -0.29
H3F3AP84243 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.25□□□□□ -0.29
H3F3AP84243 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3AP84243 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3AP84243 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3AP84243 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
H3F3AP84243 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3AP84243 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3AP84243 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3AP84243 AL590440.2-201ENST00000641973 1595 ntBASIC13.25□□□□□ -0.29
H3F3AP84243 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3AP84243 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3AP84243 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.25□□□□□ -0.29
H3F3AP84243 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
H3F3AP84243 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms