Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 FAM58DP-201ENST00000428076 619 ntBASIC10.54□□□□□ -0.72
RPL39P62891 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC10.54□□□□□ -0.72
RPL39P62891 ACTG1P14-201ENST00000446382 1122 ntBASIC10.54□□□□□ -0.72
RPL39P62891 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC10.54□□□□□ -0.72
RPL39P62891 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC10.54□□□□□ -0.72
RPL39P62891 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
RPL39P62891 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 GATD1-206ENST00000526325 756 ntTSL 5 BASIC10.54□□□□□ -0.72
RPL39P62891 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC10.54□□□□□ -0.72
RPL39P62891 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC10.54□□□□□ -0.72
RPL39P62891 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC10.54□□□□□ -0.72
RPL39P62891 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
RPL39P62891 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC10.54□□□□□ -0.72
RPL39P62891 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC10.54□□□□□ -0.72
RPL39P62891 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC10.54□□□□□ -0.72
RPL39P62891 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC10.54□□□□□ -0.72
RPL39P62891 FAM197Y3-203ENST00000618346 717 ntBASIC10.54□□□□□ -0.72
RPL39P62891 AC073548.1-201ENST00000624088 1882 ntBASIC10.54□□□□□ -0.72
RPL39P62891 CAND2-206ENST00000626378 333 ntTSL 5 BASIC10.54□□□□□ -0.72
RPL39P62891 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC10.54□□□□□ -0.72
RPL39P62891 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
RPL39P62891 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC10.54□□□□□ -0.72
RPL39P62891 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
RPL39P62891 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
RPL39P62891 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC10.54□□□□□ -0.72
RPL39P62891 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 RN7SL832P-201ENST00000607781 1756 ntBASIC10.54□□□□□ -0.72
RPL39P62891 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC10.54□□□□□ -0.72
RPL39P62891 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
RPL39P62891 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
RPL39P62891 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPL39P62891 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
RPL39P62891 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPL39P62891 AC015818.8-201ENST00000587907 1519 ntBASIC10.53□□□□□ -0.72
RPL39P62891 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPL39P62891 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC10.53□□□□□ -0.72
RPL39P62891 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPL39P62891 SLC6A6P1-201ENST00000413933 1850 ntBASIC10.53□□□□□ -0.72
RPL39P62891 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
RPL39P62891 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RPL39P62891 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC10.53□□□□□ -0.72
RPL39P62891 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPL39P62891 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
RPL39P62891 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPL39P62891 GSN-209ENST00000449733 2702 ntTSL 2 BASIC10.53□□□□□ -0.72
RPL39P62891 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPL39P62891 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPL39P62891 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPL39P62891 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPL39P62891 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC10.53□□□□□ -0.72
RPL39P62891 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC10.53□□□□□ -0.72
RPL39P62891 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC10.53□□□□□ -0.72
RPL39P62891 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPL39P62891 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
RPL39P62891 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
RPL39P62891 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPL39P62891 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC10.53□□□□□ -0.72
RPL39P62891 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPL39P62891 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPL39P62891 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPL39P62891 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
RPL39P62891 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
RPL39P62891 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPL39P62891 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RPL39P62891 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC10.53□□□□□ -0.72
RPL39P62891 TOMM22P5-201ENST00000416399 439 ntBASIC10.53□□□□□ -0.72
RPL39P62891 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC10.53□□□□□ -0.72
RPL39P62891 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC10.53□□□□□ -0.72
RPL39P62891 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC10.53□□□□□ -0.72
RPL39P62891 SERBP1P3-201ENST00000459980 809 ntBASIC10.53□□□□□ -0.72
RPL39P62891 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC10.53□□□□□ -0.72
RPL39P62891 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC10.53□□□□□ -0.72
RPL39P62891 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC10.53□□□□□ -0.72
RPL39P62891 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPL39P62891 AL589739.1-201ENST00000607720 493 ntBASIC10.53□□□□□ -0.72
RPL39P62891 AL033527.5-202ENST00000641632 1098 ntBASIC10.53□□□□□ -0.72
RPL39P62891 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPL39P62891 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RPL39P62891 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPL39P62891 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RPL39P62891 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
RPL39P62891 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
RPL39P62891 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms