Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.83□□□□□ -0.36
ACTBP60709 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.83□□□□□ -0.36
ACTBP60709 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ACTBP60709 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ACTBP60709 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ACTBP60709 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ACTBP60709 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ACTBP60709 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.83□□□□□ -0.36
ACTBP60709 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ACTBP60709 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ACTBP60709 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ACTBP60709 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
ACTBP60709 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.83□□□□□ -0.36
ACTBP60709 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ACTBP60709 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ACTBP60709 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.83□□□□□ -0.36
ACTBP60709 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.83□□□□□ -0.36
ACTBP60709 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ACTBP60709 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.83□□□□□ -0.36
ACTBP60709 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.83□□□□□ -0.36
ACTBP60709 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.82□□□□□ -0.36
ACTBP60709 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ACTBP60709 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.82□□□□□ -0.36
ACTBP60709 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
ACTBP60709 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.82□□□□□ -0.36
ACTBP60709 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ACTBP60709 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.82□□□□□ -0.36
ACTBP60709 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ACTBP60709 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.82□□□□□ -0.36
ACTBP60709 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.82□□□□□ -0.36
ACTBP60709 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.82□□□□□ -0.36
ACTBP60709 AC015922.1-201ENST00000421102 1152 ntBASIC12.82□□□□□ -0.36
ACTBP60709 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.82□□□□□ -0.36
ACTBP60709 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.82□□□□□ -0.36
ACTBP60709 AC109322.1-201ENST00000524499 1264 ntBASIC12.82□□□□□ -0.36
ACTBP60709 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.82□□□□□ -0.36
ACTBP60709 AC025678.2-201ENST00000562061 970 ntBASIC12.82□□□□□ -0.36
ACTBP60709 RN7SL828P-201ENST00000607615 303 ntBASIC12.82□□□□□ -0.36
ACTBP60709 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.82□□□□□ -0.36
ACTBP60709 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.82□□□□□ -0.36
ACTBP60709 AC015909.5-201ENST00000624336 2266 ntBASIC12.82□□□□□ -0.36
ACTBP60709 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
ACTBP60709 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.82□□□□□ -0.36
ACTBP60709 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.82□□□□□ -0.36
ACTBP60709 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
ACTBP60709 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
ACTBP60709 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTBP60709 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
ACTBP60709 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.82□□□□□ -0.36
ACTBP60709 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
ACTBP60709 KRT8P12-202ENST00000472924 1397 ntBASIC12.81□□□□□ -0.36
ACTBP60709 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ACTBP60709 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
ACTBP60709 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ACTBP60709 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ACTBP60709 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ACTBP60709 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.81□□□□□ -0.36
ACTBP60709 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ACTBP60709 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
ACTBP60709 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ACTBP60709 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ACTBP60709 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ACTBP60709 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.81□□□□□ -0.36
ACTBP60709 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.81□□□□□ -0.36
ACTBP60709 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
ACTBP60709 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
ACTBP60709 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ACTBP60709 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
ACTBP60709 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ACTBP60709 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ACTBP60709 AL139400.1-201ENST00000366220 510 ntBASIC12.81□□□□□ -0.36
ACTBP60709 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.81□□□□□ -0.36
ACTBP60709 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ACTBP60709 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms