Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC19.32■□□□□ 0.68
RIPK4P57078 MIR3615-201ENST00000581999 87 ntBASIC19.32■□□□□ 0.68
RIPK4P57078 DIO1-215ENST00000610607 796 ntTSL 5 BASIC19.32■□□□□ 0.68
RIPK4P57078 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
RIPK4P57078 AC140479.7-201ENST00000636301 2332 ntBASIC19.32■□□□□ 0.68
RIPK4P57078 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RIPK4P57078 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC19.32■□□□□ 0.68
RIPK4P57078 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC19.32■□□□□ 0.68
RIPK4P57078 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC19.32■□□□□ 0.68
RIPK4P57078 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RIPK4P57078 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RIPK4P57078 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RIPK4P57078 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
RIPK4P57078 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RIPK4P57078 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
RIPK4P57078 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RIPK4P57078 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RIPK4P57078 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RIPK4P57078 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RIPK4P57078 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK4P57078 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK4P57078 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK4P57078 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC19.31■□□□□ 0.68
RIPK4P57078 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC19.31■□□□□ 0.68
RIPK4P57078 TMBIM7P-202ENST00000641474 1516 ntBASIC19.31■□□□□ 0.68
RIPK4P57078 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK4P57078 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK4P57078 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC19.31■□□□□ 0.68
RIPK4P57078 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK4P57078 DPM3-202ENST00000368399 517 ntBASIC19.31■□□□□ 0.68
RIPK4P57078 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK4P57078 PTPA-215ENST00000432124 567 ntTSL 4 BASIC19.31■□□□□ 0.68
RIPK4P57078 FAM58BP-201ENST00000439056 645 ntBASIC19.31■□□□□ 0.68
RIPK4P57078 AC104073.2-201ENST00000453737 312 ntBASIC19.31■□□□□ 0.68
RIPK4P57078 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC19.31■□□□□ 0.68
RIPK4P57078 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC19.31■□□□□ 0.68
RIPK4P57078 AC005962.1-201ENST00000584100 773 ntBASIC19.31■□□□□ 0.68
RIPK4P57078 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC19.31■□□□□ 0.68
RIPK4P57078 AC244093.1-201ENST00000610837 814 ntBASIC19.31■□□□□ 0.68
RIPK4P57078 MIR6787-201ENST00000616675 61 ntBASIC19.31■□□□□ 0.68
RIPK4P57078 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK4P57078 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
RIPK4P57078 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC19.31■□□□□ 0.68
RIPK4P57078 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK4P57078 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RIPK4P57078 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK4P57078 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC19.31■□□□□ 0.68
RIPK4P57078 MBLAC2-202ENST00000514906 1936 ntBASIC19.31■□□□□ 0.68
RIPK4P57078 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK4P57078 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK4P57078 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RIPK4P57078 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RIPK4P57078 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RIPK4P57078 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK4P57078 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK4P57078 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC19.3■□□□□ 0.68
RIPK4P57078 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK4P57078 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK4P57078 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RIPK4P57078 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RIPK4P57078 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK4P57078 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK4P57078 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RIPK4P57078 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK4P57078 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC19.3■□□□□ 0.68
RIPK4P57078 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK4P57078 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK4P57078 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK4P57078 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK4P57078 AC012441.2-201ENST00000444843 739 ntBASIC19.3■□□□□ 0.68
RIPK4P57078 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC19.3■□□□□ 0.68
RIPK4P57078 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
RIPK4P57078 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RIPK4P57078 KC6-205ENST00000599934 556 ntTSL 4 BASIC19.3■□□□□ 0.68
RIPK4P57078 AC004923.1-202ENST00000642106 209 ntBASIC19.3■□□□□ 0.68
RIPK4P57078 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK4P57078 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
RIPK4P57078 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK4P57078 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK4P57078 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK4P57078 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RIPK4P57078 LINC00552-201ENST00000625151 2579 ntBASIC19.3■□□□□ 0.68
RIPK4P57078 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC19.3■□□□□ 0.68
RIPK4P57078 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIPK4P57078 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RIPK4P57078 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIPK4P57078 AP001267.2-201ENST00000532619 2086 ntBASIC19.29■□□□□ 0.68
RIPK4P57078 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIPK4P57078 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC19.29■□□□□ 0.68
RIPK4P57078 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RIPK4P57078 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIPK4P57078 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RIPK4P57078 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIPK4P57078 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
RIPK4P57078 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC19.29■□□□□ 0.68
RIPK4P57078 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC19.29■□□□□ 0.68
RIPK4P57078 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIPK4P57078 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIPK4P57078 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIPK4P57078 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms