Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CLDN8P56748 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CLDN8P56748 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CLDN8P56748 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
CLDN8P56748 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN8P56748 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN8P56748 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN8P56748 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.11□□□□□ -0.15
CLDN8P56748 CICP16-201ENST00000502609 2813 ntBASIC14.11□□□□□ -0.15
CLDN8P56748 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN8P56748 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN8P56748 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN8P56748 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.11□□□□□ -0.15
CLDN8P56748 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.11□□□□□ -0.15
CLDN8P56748 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN8P56748 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN8P56748 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN8P56748 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN8P56748 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN8P56748 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN8P56748 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CLDN8P56748 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.11□□□□□ -0.15
CLDN8P56748 AL162726.2-201ENST00000438986 1017 ntBASIC14.11□□□□□ -0.15
CLDN8P56748 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN8P56748 TMEM198B-204ENST00000484016 896 ntBASIC14.11□□□□□ -0.15
CLDN8P56748 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CLDN8P56748 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDN8P56748 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.11□□□□□ -0.15
CLDN8P56748 BX088702.1-201ENST00000610784 235 ntBASIC14.11□□□□□ -0.15
CLDN8P56748 CU634019.7-201ENST00000624153 1185 ntBASIC14.11□□□□□ -0.15
CLDN8P56748 FP236241.2-201ENST00000624906 1185 ntBASIC14.11□□□□□ -0.15
CLDN8P56748 AC011498.7-201ENST00000624986 2027 ntBASIC14.11□□□□□ -0.15
CLDN8P56748 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.11□□□□□ -0.15
CLDN8P56748 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN8P56748 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.11□□□□□ -0.15
CLDN8P56748 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CLDN8P56748 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN8P56748 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDN8P56748 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.11□□□□□ -0.15
CLDN8P56748 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN8P56748 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDN8P56748 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CLDN8P56748 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN8P56748 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
CLDN8P56748 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.11□□□□□ -0.15
CLDN8P56748 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLDN8P56748 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDN8P56748 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN8P56748 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN8P56748 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CLDN8P56748 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.1□□□□□ -0.15
CLDN8P56748 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
CLDN8P56748 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN8P56748 AC139712.1-201ENST00000378256 1875 ntBASIC14.1□□□□□ -0.15
CLDN8P56748 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN8P56748 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN8P56748 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN8P56748 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.1□□□□□ -0.15
CLDN8P56748 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN8P56748 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.1□□□□□ -0.15
CLDN8P56748 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CLDN8P56748 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.1□□□□□ -0.15
CLDN8P56748 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN8P56748 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CLDN8P56748 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.1□□□□□ -0.15
CLDN8P56748 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN8P56748 KHSRPP1-201ENST00000427983 1768 ntBASIC14.1□□□□□ -0.15
CLDN8P56748 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN8P56748 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN8P56748 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN8P56748 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN8P56748 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.1□□□□□ -0.15
CLDN8P56748 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN8P56748 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.1□□□□□ -0.15
CLDN8P56748 AC009486.1-201ENST00000569860 813 ntBASIC14.1□□□□□ -0.15
CLDN8P56748 AC004233.3-201ENST00000607794 1269 ntBASIC14.1□□□□□ -0.15
CLDN8P56748 AC006538.3-201ENST00000612495 578 ntBASIC14.1□□□□□ -0.15
CLDN8P56748 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN8P56748 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN8P56748 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.1□□□□□ -0.15
CLDN8P56748 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN8P56748 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.1□□□□□ -0.15
CLDN8P56748 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.1□□□□□ -0.15
CLDN8P56748 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN8P56748 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN8P56748 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CLDN8P56748 CLUHP2-201ENST00000426660 1303 ntBASIC14.1□□□□□ -0.15
CLDN8P56748 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN8P56748 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN8P56748 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN8P56748 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN8P56748 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.1□□□□□ -0.15
CLDN8P56748 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.1□□□□□ -0.15
CLDN8P56748 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN8P56748 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN8P56748 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
CLDN8P56748 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CLDN8P56748 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDN8P56748 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CLDN8P56748 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms