Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 SLED1-202ENST00000512051 380 ntBASIC13.99□□□□□ -0.17
SMSP52788 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.99□□□□□ -0.17
SMSP52788 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.99□□□□□ -0.17
SMSP52788 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.99□□□□□ -0.17
SMSP52788 AC124283.3-201ENST00000570869 594 ntBASIC13.99□□□□□ -0.17
SMSP52788 AL049840.4-201ENST00000602422 811 ntBASIC13.99□□□□□ -0.17
SMSP52788 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.99□□□□□ -0.17
SMSP52788 AL354718.3-201ENST00000616414 581 ntBASIC13.99□□□□□ -0.17
SMSP52788 CR382287.1-201ENST00000623954 586 ntBASIC13.99□□□□□ -0.17
SMSP52788 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SMSP52788 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.99□□□□□ -0.17
SMSP52788 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.99□□□□□ -0.17
SMSP52788 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SMSP52788 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMSP52788 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMSP52788 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMSP52788 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.99□□□□□ -0.17
SMSP52788 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.99□□□□□ -0.17
SMSP52788 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SMSP52788 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SMSP52788 REXO1L4P-201ENST00000605109 1937 ntBASIC13.99□□□□□ -0.17
SMSP52788 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMSP52788 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMSP52788 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMSP52788 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMSP52788 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMSP52788 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMSP52788 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.99□□□□□ -0.17
SMSP52788 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMSP52788 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.99□□□□□ -0.17
SMSP52788 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.99□□□□□ -0.17
SMSP52788 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMSP52788 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMSP52788 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMSP52788 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
SMSP52788 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SMSP52788 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
SMSP52788 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SMSP52788 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.98□□□□□ -0.17
SMSP52788 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 HSPA7-201ENST00000445535 1927 ntBASIC13.98□□□□□ -0.17
SMSP52788 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.98□□□□□ -0.17
SMSP52788 AC134312.5-201ENST00000568031 1313 ntBASIC13.98□□□□□ -0.17
SMSP52788 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.98□□□□□ -0.17
SMSP52788 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 AC006504.5-208ENST00000588784 2401 ntBASIC13.98□□□□□ -0.17
SMSP52788 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
SMSP52788 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SMSP52788 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SMSP52788 AL133267.1-201ENST00000398220 340 ntBASIC13.98□□□□□ -0.17
SMSP52788 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.98□□□□□ -0.17
SMSP52788 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.98□□□□□ -0.17
SMSP52788 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.98□□□□□ -0.17
SMSP52788 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.98□□□□□ -0.17
SMSP52788 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.98□□□□□ -0.17
SMSP52788 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.98□□□□□ -0.17
SMSP52788 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
SMSP52788 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.98□□□□□ -0.17
SMSP52788 AC243960.2-201ENST00000600996 747 ntBASIC13.98□□□□□ -0.17
SMSP52788 RHOXF1P1-202ENST00000635473 501 ntBASIC13.98□□□□□ -0.17
SMSP52788 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
SMSP52788 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.98□□□□□ -0.17
SMSP52788 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SMSP52788 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.98□□□□□ -0.17
SMSP52788 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SMSP52788 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
SMSP52788 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 LINC01230-201ENST00000625222 3017 ntBASIC13.98□□□□□ -0.17
SMSP52788 AC027601.5-201ENST00000624065 2482 ntBASIC13.98□□□□□ -0.17
SMSP52788 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.98□□□□□ -0.17
SMSP52788 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMSP52788 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
SMSP52788 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms