Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC14.06□□□□□ -0.16
CLK1P49759 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLK1P49759 COL6A4P2-202ENST00000504443 2753 ntBASIC14.06□□□□□ -0.16
CLK1P49759 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CLK1P49759 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.06□□□□□ -0.16
CLK1P49759 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLK1P49759 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLK1P49759 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLK1P49759 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLK1P49759 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.06□□□□□ -0.16
CLK1P49759 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
CLK1P49759 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CLK1P49759 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CLK1P49759 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CLK1P49759 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
CLK1P49759 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.06□□□□□ -0.16
CLK1P49759 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLK1P49759 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.06□□□□□ -0.16
CLK1P49759 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLK1P49759 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLK1P49759 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CLK1P49759 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLK1P49759 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CLK1P49759 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLK1P49759 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.06□□□□□ -0.16
CLK1P49759 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLK1P49759 AC093004.1-201ENST00000508850 424 ntBASIC14.06□□□□□ -0.16
CLK1P49759 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.06□□□□□ -0.16
CLK1P49759 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.06□□□□□ -0.16
CLK1P49759 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLK1P49759 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLK1P49759 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLK1P49759 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CLK1P49759 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLK1P49759 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLK1P49759 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLK1P49759 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.06□□□□□ -0.16
CLK1P49759 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLK1P49759 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CLK1P49759 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CLK1P49759 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.06□□□□□ -0.16
CLK1P49759 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.06□□□□□ -0.16
CLK1P49759 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.06□□□□□ -0.16
CLK1P49759 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLK1P49759 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 AC005562.1-201ENST00000583030 3219 ntBASIC14.05□□□□□ -0.16
CLK1P49759 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.05□□□□□ -0.16
CLK1P49759 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
CLK1P49759 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CLK1P49759 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.05□□□□□ -0.16
CLK1P49759 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.05□□□□□ -0.16
CLK1P49759 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 TCAF1P1-201ENST00000414990 2232 ntBASIC14.05□□□□□ -0.16
CLK1P49759 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.05□□□□□ -0.16
CLK1P49759 AC089987.1-201ENST00000551654 2209 ntBASIC14.05□□□□□ -0.16
CLK1P49759 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.05□□□□□ -0.16
CLK1P49759 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CLK1P49759 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.05□□□□□ -0.16
CLK1P49759 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.05□□□□□ -0.16
CLK1P49759 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.05□□□□□ -0.16
CLK1P49759 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 SPCS2P1-201ENST00000561636 679 ntBASIC14.05□□□□□ -0.16
CLK1P49759 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.05□□□□□ -0.16
CLK1P49759 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.05□□□□□ -0.16
CLK1P49759 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.05□□□□□ -0.16
CLK1P49759 AL355385.1-201ENST00000606123 409 ntBASIC14.05□□□□□ -0.16
CLK1P49759 AC099568.2-201ENST00000609194 695 ntBASIC14.05□□□□□ -0.16
CLK1P49759 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.05□□□□□ -0.16
CLK1P49759 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 AC007614.4-201ENST00000564048 1827 ntBASIC14.05□□□□□ -0.16
CLK1P49759 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 AL391825.1-201ENST00000457671 1364 ntBASIC14.05□□□□□ -0.16
CLK1P49759 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
CLK1P49759 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CLK1P49759 AC152010.1-201ENST00000415779 2006 ntBASIC14.05□□□□□ -0.16
CLK1P49759 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CLK1P49759 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 STRCP1-201ENST00000509801 5328 ntBASIC14.05□□□□□ -0.16
CLK1P49759 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLK1P49759 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 201.1 ms