Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CBX5P45973 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.88□□□□□ -0.35
CBX5P45973 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.88□□□□□ -0.35
CBX5P45973 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CBX5P45973 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.88□□□□□ -0.35
CBX5P45973 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.88□□□□□ -0.35
CBX5P45973 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CBX5P45973 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CBX5P45973 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CBX5P45973 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CBX5P45973 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CBX5P45973 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CBX5P45973 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
CBX5P45973 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.88□□□□□ -0.35
CBX5P45973 KRT18P3-201ENST00000451602 1288 ntBASIC12.88□□□□□ -0.35
CBX5P45973 AC069335.1-201ENST00000489972 472 ntBASIC12.88□□□□□ -0.35
CBX5P45973 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CBX5P45973 ALG1L8P-201ENST00000533887 760 ntBASIC12.88□□□□□ -0.35
CBX5P45973 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.88□□□□□ -0.35
CBX5P45973 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.88□□□□□ -0.35
CBX5P45973 SAMD11P1-201ENST00000571429 661 ntBASIC12.88□□□□□ -0.35
CBX5P45973 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.88□□□□□ -0.35
CBX5P45973 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
CBX5P45973 FAM197Y3-203ENST00000618346 717 ntBASIC12.88□□□□□ -0.35
CBX5P45973 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.88□□□□□ -0.35
CBX5P45973 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.88□□□□□ -0.35
CBX5P45973 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.88□□□□□ -0.35
CBX5P45973 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.88□□□□□ -0.35
CBX5P45973 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CBX5P45973 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CBX5P45973 AL591122.2-201ENST00000624125 1853 ntBASIC12.88□□□□□ -0.35
CBX5P45973 MAPK10-262ENST00000641051 5738 ntBASIC12.88□□□□□ -0.35
CBX5P45973 AL357140.3-201ENST00000639753 1983 ntBASIC12.88□□□□□ -0.35
CBX5P45973 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.88□□□□□ -0.35
CBX5P45973 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.88□□□□□ -0.35
CBX5P45973 MST1P2-201ENST00000457982 2291 ntBASIC12.88□□□□□ -0.35
CBX5P45973 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.88□□□□□ -0.35
CBX5P45973 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.88□□□□□ -0.35
CBX5P45973 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CBX5P45973 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CBX5P45973 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CBX5P45973 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
CBX5P45973 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CBX5P45973 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CBX5P45973 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CBX5P45973 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CBX5P45973 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.88□□□□□ -0.35
CBX5P45973 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CBX5P45973 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CBX5P45973 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CBX5P45973 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CBX5P45973 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CBX5P45973 KRT8P22-201ENST00000562317 1415 ntBASIC12.88□□□□□ -0.35
CBX5P45973 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CBX5P45973 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CBX5P45973 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.87□□□□□ -0.35
CBX5P45973 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
CBX5P45973 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC12.87□□□□□ -0.35
CBX5P45973 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.87□□□□□ -0.35
CBX5P45973 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CBX5P45973 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CBX5P45973 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CBX5P45973 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CBX5P45973 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.87□□□□□ -0.35
CBX5P45973 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CBX5P45973 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.87□□□□□ -0.35
CBX5P45973 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CBX5P45973 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CBX5P45973 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.87□□□□□ -0.35
CBX5P45973 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.87□□□□□ -0.35
CBX5P45973 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CBX5P45973 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CBX5P45973 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CBX5P45973 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.87□□□□□ -0.35
CBX5P45973 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CBX5P45973 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CBX5P45973 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CBX5P45973 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CBX5P45973 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CBX5P45973 AC015922.1-201ENST00000421102 1152 ntBASIC12.87□□□□□ -0.35
CBX5P45973 MED15P5-201ENST00000423150 992 ntBASIC12.87□□□□□ -0.35
CBX5P45973 AL450487.1-201ENST00000426799 995 ntBASIC12.87□□□□□ -0.35
CBX5P45973 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.87□□□□□ -0.35
CBX5P45973 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.87□□□□□ -0.35
CBX5P45973 SERBP1P3-201ENST00000459980 809 ntBASIC12.87□□□□□ -0.35
CBX5P45973 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.87□□□□□ -0.35
CBX5P45973 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.87□□□□□ -0.35
CBX5P45973 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.87□□□□□ -0.35
CBX5P45973 RN7SL828P-201ENST00000607615 303 ntBASIC12.87□□□□□ -0.35
CBX5P45973 AC074044.1-201ENST00000609673 707 ntBASIC12.87□□□□□ -0.35
CBX5P45973 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.87□□□□□ -0.35
CBX5P45973 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CBX5P45973 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CBX5P45973 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CBX5P45973 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CBX5P45973 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CBX5P45973 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CBX5P45973 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CBX5P45973 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CBX5P45973 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms