Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AP001889.1-201ENST00000525414 633 ntBASIC14.45□□□□□ -0.1
HNF4AP41235 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.45□□□□□ -0.1
HNF4AP41235 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.45□□□□□ -0.1
HNF4AP41235 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HNF4AP41235 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.45□□□□□ -0.1
HNF4AP41235 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HNF4AP41235 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.45□□□□□ -0.1
HNF4AP41235 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HNF4AP41235 AC015802.1-201ENST00000588104 1449 ntBASIC14.45□□□□□ -0.1
HNF4AP41235 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HNF4AP41235 AL035252.4-201ENST00000624174 288 ntBASIC14.45□□□□□ -0.1
HNF4AP41235 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HNF4AP41235 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HNF4AP41235 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.45□□□□□ -0.1
HNF4AP41235 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.45□□□□□ -0.1
HNF4AP41235 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HNF4AP41235 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
HNF4AP41235 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.45□□□□□ -0.1
HNF4AP41235 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HNF4AP41235 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
HNF4AP41235 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HNF4AP41235 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.45□□□□□ -0.1
HNF4AP41235 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.44□□□□□ -0.1
HNF4AP41235 AC003102.2-201ENST00000589195 1469 ntBASIC14.44□□□□□ -0.1
HNF4AP41235 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HNF4AP41235 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.44□□□□□ -0.1
HNF4AP41235 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
HNF4AP41235 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HNF4AP41235 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HNF4AP41235 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.44□□□□□ -0.1
HNF4AP41235 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.44□□□□□ -0.1
HNF4AP41235 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HNF4AP41235 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
HNF4AP41235 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HNF4AP41235 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HNF4AP41235 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HNF4AP41235 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HNF4AP41235 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.44□□□□□ -0.1
HNF4AP41235 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HNF4AP41235 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HNF4AP41235 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.44□□□□□ -0.1
HNF4AP41235 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.44□□□□□ -0.1
HNF4AP41235 AC022447.6-201ENST00000515522 438 ntBASIC14.44□□□□□ -0.1
HNF4AP41235 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
HNF4AP41235 AC015936.2-201ENST00000593177 259 ntBASIC14.44□□□□□ -0.1
HNF4AP41235 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.44□□□□□ -0.1
HNF4AP41235 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.44□□□□□ -0.1
HNF4AP41235 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HNF4AP41235 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HNF4AP41235 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HNF4AP41235 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HNF4AP41235 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HNF4AP41235 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HNF4AP41235 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HNF4AP41235 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.44□□□□□ -0.1
HNF4AP41235 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HNF4AP41235 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HNF4AP41235 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HNF4AP41235 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HNF4AP41235 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HNF4AP41235 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.44□□□□□ -0.1
HNF4AP41235 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.43□□□□□ -0.1
HNF4AP41235 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
HNF4AP41235 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HNF4AP41235 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.43□□□□□ -0.1
HNF4AP41235 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HNF4AP41235 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.43□□□□□ -0.1
HNF4AP41235 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.43□□□□□ -0.1
HNF4AP41235 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
HNF4AP41235 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HNF4AP41235 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HNF4AP41235 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.43□□□□□ -0.1
HNF4AP41235 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HNF4AP41235 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.43□□□□□ -0.1
HNF4AP41235 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.43□□□□□ -0.1
HNF4AP41235 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HNF4AP41235 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HNF4AP41235 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HNF4AP41235 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HNF4AP41235 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.43□□□□□ -0.1
HNF4AP41235 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HNF4AP41235 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
HNF4AP41235 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.43□□□□□ -0.1
HNF4AP41235 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.43□□□□□ -0.1
HNF4AP41235 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.43□□□□□ -0.1
HNF4AP41235 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.43□□□□□ -0.1
HNF4AP41235 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HNF4AP41235 FO681548.1-201ENST00000455617 1132 ntBASIC14.43□□□□□ -0.1
HNF4AP41235 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.43□□□□□ -0.1
HNF4AP41235 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.43□□□□□ -0.1
HNF4AP41235 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
HNF4AP41235 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.43□□□□□ -0.1
HNF4AP41235 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.43□□□□□ -0.1
HNF4AP41235 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.43□□□□□ -0.1
HNF4AP41235 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.43□□□□□ -0.1
HNF4AP41235 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
HNF4AP41235 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HNF4AP41235 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
HNF4AP41235 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HNF4AP41235 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms