Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LCN1P31025 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.79□□□□□ -0.2
LCN1P31025 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LCN1P31025 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.79□□□□□ -0.2
LCN1P31025 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LCN1P31025 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
LCN1P31025 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LCN1P31025 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.79□□□□□ -0.2
LCN1P31025 BOLA2P3-201ENST00000404566 256 ntBASIC13.79□□□□□ -0.2
LCN1P31025 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
LCN1P31025 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.79□□□□□ -0.2
LCN1P31025 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.79□□□□□ -0.2
LCN1P31025 AC131206.1-201ENST00000538078 1211 ntBASIC13.79□□□□□ -0.2
LCN1P31025 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.79□□□□□ -0.2
LCN1P31025 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LCN1P31025 LINC02084-201ENST00000606069 1096 ntBASIC13.79□□□□□ -0.2
LCN1P31025 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.79□□□□□ -0.2
LCN1P31025 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.79□□□□□ -0.2
LCN1P31025 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.79□□□□□ -0.2
LCN1P31025 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.79□□□□□ -0.2
LCN1P31025 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LCN1P31025 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LCN1P31025 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
LCN1P31025 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.79□□□□□ -0.2
LCN1P31025 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LCN1P31025 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LCN1P31025 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.79□□□□□ -0.2
LCN1P31025 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LCN1P31025 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LCN1P31025 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LCN1P31025 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.79□□□□□ -0.2
LCN1P31025 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.79□□□□□ -0.2
LCN1P31025 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LCN1P31025 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LCN1P31025 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LCN1P31025 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LCN1P31025 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LCN1P31025 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LCN1P31025 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LCN1P31025 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.78□□□□□ -0.2
LCN1P31025 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.78□□□□□ -0.2
LCN1P31025 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LCN1P31025 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.78□□□□□ -0.2
LCN1P31025 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
LCN1P31025 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.78□□□□□ -0.2
LCN1P31025 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LCN1P31025 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LCN1P31025 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.78□□□□□ -0.2
LCN1P31025 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LCN1P31025 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
LCN1P31025 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LCN1P31025 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LCN1P31025 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LCN1P31025 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LCN1P31025 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LCN1P31025 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LCN1P31025 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LCN1P31025 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LCN1P31025 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.78□□□□□ -0.2
LCN1P31025 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.78□□□□□ -0.2
LCN1P31025 GAPDHP21-201ENST00000450301 1010 ntBASIC13.78□□□□□ -0.2
LCN1P31025 TPT1P11-201ENST00000458482 498 ntBASIC13.78□□□□□ -0.2
LCN1P31025 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
LCN1P31025 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.78□□□□□ -0.2
LCN1P31025 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.78□□□□□ -0.2
LCN1P31025 AC132938.2-201ENST00000579188 680 ntBASIC13.78□□□□□ -0.2
LCN1P31025 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.78□□□□□ -0.2
LCN1P31025 AC012645.4-201ENST00000610691 1061 ntBASIC13.78□□□□□ -0.2
LCN1P31025 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.78□□□□□ -0.2
LCN1P31025 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LCN1P31025 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LCN1P31025 IGHV3-72-202ENST00000621503 303 ntBASIC13.78□□□□□ -0.2
LCN1P31025 AL591163.1-201ENST00000641757 987 ntBASIC13.78□□□□□ -0.2
LCN1P31025 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LCN1P31025 CLUHP2-201ENST00000426660 1303 ntBASIC13.78□□□□□ -0.2
LCN1P31025 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LCN1P31025 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.78□□□□□ -0.2
LCN1P31025 AP000593.2-201ENST00000542775 1433 ntBASIC13.78□□□□□ -0.2
LCN1P31025 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
LCN1P31025 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LCN1P31025 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.78□□□□□ -0.2
LCN1P31025 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LCN1P31025 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LCN1P31025 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LCN1P31025 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LCN1P31025 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LCN1P31025 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LCN1P31025 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LCN1P31025 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LCN1P31025 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LCN1P31025 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.77□□□□□ -0.2
LCN1P31025 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.77□□□□□ -0.2
LCN1P31025 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
LCN1P31025 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.77□□□□□ -0.2
LCN1P31025 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
LCN1P31025 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LCN1P31025 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LCN1P31025 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
LCN1P31025 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
LCN1P31025 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms