Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
GABRB3P28472 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.7□□□□□ -0.06
GABRB3P28472 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
GABRB3P28472 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GABRB3P28472 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GABRB3P28472 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GABRB3P28472 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GABRB3P28472 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GABRB3P28472 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GABRB3P28472 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
GABRB3P28472 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.69□□□□□ -0.06
GABRB3P28472 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.69□□□□□ -0.06
GABRB3P28472 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
GABRB3P28472 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
GABRB3P28472 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
GABRB3P28472 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GABRB3P28472 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.69□□□□□ -0.06
GABRB3P28472 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GABRB3P28472 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
GABRB3P28472 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GABRB3P28472 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GABRB3P28472 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GABRB3P28472 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.69□□□□□ -0.06
GABRB3P28472 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
GABRB3P28472 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
GABRB3P28472 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GABRB3P28472 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.69□□□□□ -0.06
GABRB3P28472 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GABRB3P28472 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
GABRB3P28472 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GABRB3P28472 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
GABRB3P28472 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GABRB3P28472 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.69□□□□□ -0.06
GABRB3P28472 AP006294.1-201ENST00000415407 339 ntBASIC14.69□□□□□ -0.06
GABRB3P28472 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.69□□□□□ -0.06
GABRB3P28472 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.69□□□□□ -0.06
GABRB3P28472 HMGN1P19-201ENST00000436976 333 ntBASIC14.69□□□□□ -0.06
GABRB3P28472 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.69□□□□□ -0.06
GABRB3P28472 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.69□□□□□ -0.06
GABRB3P28472 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
GABRB3P28472 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GABRB3P28472 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
GABRB3P28472 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
GABRB3P28472 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.69□□□□□ -0.06
GABRB3P28472 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.69□□□□□ -0.06
GABRB3P28472 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
GABRB3P28472 ECM1P1-201ENST00000604092 1279 ntBASIC14.69□□□□□ -0.06
GABRB3P28472 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
GABRB3P28472 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.69□□□□□ -0.06
GABRB3P28472 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.69□□□□□ -0.06
GABRB3P28472 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GABRB3P28472 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GABRB3P28472 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
GABRB3P28472 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GABRB3P28472 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
GABRB3P28472 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.69□□□□□ -0.06
GABRB3P28472 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.69□□□□□ -0.06
GABRB3P28472 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
GABRB3P28472 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.69□□□□□ -0.06
GABRB3P28472 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GABRB3P28472 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
GABRB3P28472 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GABRB3P28472 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
GABRB3P28472 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GABRB3P28472 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRB3P28472 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GABRB3P28472 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRB3P28472 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
GABRB3P28472 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GABRB3P28472 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.68□□□□□ -0.06
GABRB3P28472 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRB3P28472 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRB3P28472 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.68□□□□□ -0.06
GABRB3P28472 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRB3P28472 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.68□□□□□ -0.06
GABRB3P28472 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRB3P28472 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRB3P28472 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.68□□□□□ -0.06
GABRB3P28472 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.68□□□□□ -0.06
GABRB3P28472 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
GABRB3P28472 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
GABRB3P28472 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.68□□□□□ -0.06
GABRB3P28472 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
GABRB3P28472 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRB3P28472 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRB3P28472 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRB3P28472 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.68□□□□□ -0.06
GABRB3P28472 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GABRB3P28472 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GABRB3P28472 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
GABRB3P28472 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
GABRB3P28472 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.68□□□□□ -0.06
GABRB3P28472 USP32P1-208ENST00000506594 1164 ntBASIC14.68□□□□□ -0.06
GABRB3P28472 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.68□□□□□ -0.06
GABRB3P28472 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.68□□□□□ -0.06
GABRB3P28472 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.68□□□□□ -0.06
GABRB3P28472 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.68□□□□□ -0.06
GABRB3P28472 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.68□□□□□ -0.06
GABRB3P28472 AC025048.6-201ENST00000634326 1161 ntBASIC14.68□□□□□ -0.06
GABRB3P28472 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms