Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.53□□□□□ -0.4
COL8A2P25067 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
COL8A2P25067 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COL8A2P25067 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.53□□□□□ -0.4
COL8A2P25067 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COL8A2P25067 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
COL8A2P25067 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COL8A2P25067 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.53□□□□□ -0.4
COL8A2P25067 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
COL8A2P25067 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COL8A2P25067 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.53□□□□□ -0.4
COL8A2P25067 ZBED1P1-201ENST00000502364 1930 ntBASIC12.53□□□□□ -0.4
COL8A2P25067 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.4
COL8A2P25067 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COL8A2P25067 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.53□□□□□ -0.4
COL8A2P25067 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.53□□□□□ -0.4
COL8A2P25067 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COL8A2P25067 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COL8A2P25067 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
COL8A2P25067 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COL8A2P25067 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COL8A2P25067 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.53□□□□□ -0.4
COL8A2P25067 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.53□□□□□ -0.4
COL8A2P25067 TLE1P1-201ENST00000422965 589 ntBASIC12.53□□□□□ -0.4
COL8A2P25067 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COL8A2P25067 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.53□□□□□ -0.4
COL8A2P25067 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.53□□□□□ -0.4
COL8A2P25067 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.53□□□□□ -0.4
COL8A2P25067 AC100827.2-201ENST00000563214 1194 ntBASIC12.53□□□□□ -0.4
COL8A2P25067 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.53□□□□□ -0.4
COL8A2P25067 DUX4L46-201ENST00000566845 751 ntBASIC12.53□□□□□ -0.4
COL8A2P25067 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.53□□□□□ -0.4
COL8A2P25067 AC020914.3-201ENST00000594712 304 ntBASIC12.53□□□□□ -0.4
COL8A2P25067 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.53□□□□□ -0.4
COL8A2P25067 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.53□□□□□ -0.4
COL8A2P25067 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
COL8A2P25067 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COL8A2P25067 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COL8A2P25067 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COL8A2P25067 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COL8A2P25067 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COL8A2P25067 KRT8P29-201ENST00000420409 1371 ntBASIC12.53□□□□□ -0.4
COL8A2P25067 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COL8A2P25067 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COL8A2P25067 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.53□□□□□ -0.4
COL8A2P25067 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.53□□□□□ -0.4
COL8A2P25067 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COL8A2P25067 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
COL8A2P25067 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
COL8A2P25067 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
COL8A2P25067 AC138028.6-201ENST00000616106 1482 ntBASIC12.53□□□□□ -0.4
COL8A2P25067 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COL8A2P25067 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COL8A2P25067 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
COL8A2P25067 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
COL8A2P25067 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
COL8A2P25067 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
COL8A2P25067 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
COL8A2P25067 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.52□□□□□ -0.4
COL8A2P25067 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.52□□□□□ -0.4
COL8A2P25067 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COL8A2P25067 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COL8A2P25067 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COL8A2P25067 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COL8A2P25067 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COL8A2P25067 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COL8A2P25067 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
COL8A2P25067 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.52□□□□□ -0.41
COL8A2P25067 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COL8A2P25067 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COL8A2P25067 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.52□□□□□ -0.41
COL8A2P25067 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.52□□□□□ -0.41
COL8A2P25067 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.52□□□□□ -0.41
COL8A2P25067 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COL8A2P25067 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COL8A2P25067 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.52□□□□□ -0.41
COL8A2P25067 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.52□□□□□ -0.41
COL8A2P25067 CALR4P-201ENST00000431943 946 ntBASIC12.52□□□□□ -0.41
COL8A2P25067 EIF4HP1-201ENST00000453115 687 ntBASIC12.52□□□□□ -0.41
COL8A2P25067 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.52□□□□□ -0.41
COL8A2P25067 AC091804.1-201ENST00000486888 567 ntBASIC12.52□□□□□ -0.41
COL8A2P25067 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.52□□□□□ -0.41
COL8A2P25067 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
COL8A2P25067 AL023803.2-201ENST00000620080 638 ntBASIC12.52□□□□□ -0.41
COL8A2P25067 AL162426.1-201ENST00000624141 743 ntBASIC12.52□□□□□ -0.41
COL8A2P25067 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COL8A2P25067 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
COL8A2P25067 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.52□□□□□ -0.41
COL8A2P25067 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.52□□□□□ -0.41
COL8A2P25067 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.52□□□□□ -0.41
COL8A2P25067 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COL8A2P25067 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
COL8A2P25067 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.52□□□□□ -0.41
COL8A2P25067 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
COL8A2P25067 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.52□□□□□ -0.41
COL8A2P25067 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COL8A2P25067 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COL8A2P25067 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COL8A2P25067 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
COL8A2P25067 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms