Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.63□□□□□ -0.39
VAMP1P23763 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VAMP1P23763 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
VAMP1P23763 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
VAMP1P23763 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VAMP1P23763 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.62□□□□□ -0.39
VAMP1P23763 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
VAMP1P23763 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.62□□□□□ -0.39
VAMP1P23763 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
VAMP1P23763 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.62□□□□□ -0.39
VAMP1P23763 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
VAMP1P23763 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
VAMP1P23763 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.62□□□□□ -0.39
VAMP1P23763 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.62□□□□□ -0.39
VAMP1P23763 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.62□□□□□ -0.39
VAMP1P23763 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
VAMP1P23763 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
VAMP1P23763 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
VAMP1P23763 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 AC104457.1-201ENST00000401024 814 ntBASIC12.62□□□□□ -0.39
VAMP1P23763 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
VAMP1P23763 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
VAMP1P23763 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.62□□□□□ -0.39
VAMP1P23763 TARDBPP1-201ENST00000442013 1203 ntBASIC12.62□□□□□ -0.39
VAMP1P23763 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.62□□□□□ -0.39
VAMP1P23763 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.62□□□□□ -0.39
VAMP1P23763 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.62□□□□□ -0.39
VAMP1P23763 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
VAMP1P23763 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.62□□□□□ -0.39
VAMP1P23763 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.62□□□□□ -0.39
VAMP1P23763 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.62□□□□□ -0.39
VAMP1P23763 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.62□□□□□ -0.39
VAMP1P23763 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
VAMP1P23763 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 ANGPTL7-201ENST00000376819 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.62□□□□□ -0.39
VAMP1P23763 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC12.62□□□□□ -0.39
VAMP1P23763 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.62□□□□□ -0.39
VAMP1P23763 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
VAMP1P23763 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
VAMP1P23763 CES1P1-201ENST00000421606 1704 ntBASIC12.62□□□□□ -0.39
VAMP1P23763 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.62□□□□□ -0.39
VAMP1P23763 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
VAMP1P23763 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 RFX5-215ENST00000452671 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VAMP1P23763 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
VAMP1P23763 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP1P23763 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.61□□□□□ -0.39
VAMP1P23763 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.61□□□□□ -0.39
VAMP1P23763 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP1P23763 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.61□□□□□ -0.39
VAMP1P23763 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
VAMP1P23763 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP1P23763 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP1P23763 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.61□□□□□ -0.39
VAMP1P23763 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP1P23763 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.61□□□□□ -0.39
VAMP1P23763 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP1P23763 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP1P23763 NUTM2HP-201ENST00000442076 2498 ntBASIC12.61□□□□□ -0.39
VAMP1P23763 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
VAMP1P23763 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.61□□□□□ -0.39
VAMP1P23763 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP1P23763 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP1P23763 FAM90A12P-201ENST00000519497 2375 ntBASIC12.61□□□□□ -0.39
VAMP1P23763 FAM90A24P-201ENST00000520792 2369 ntBASIC12.61□□□□□ -0.39
VAMP1P23763 AC090505.1-201ENST00000430515 1834 ntBASIC12.61□□□□□ -0.39
VAMP1P23763 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP1P23763 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
VAMP1P23763 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP1P23763 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VAMP1P23763 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
VAMP1P23763 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
VAMP1P23763 FO393414.2-201ENST00000405153 598 ntBASIC12.61□□□□□ -0.39
VAMP1P23763 TFAMP1-201ENST00000412727 736 ntBASIC12.61□□□□□ -0.39
VAMP1P23763 AL671277.1-201ENST00000429656 993 ntBASIC12.61□□□□□ -0.39
VAMP1P23763 AC093909.1-201ENST00000504731 1122 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms