Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TNFSF4P23510 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.75□□□□□ -0.37
TNFSF4P23510 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
TNFSF4P23510 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.75□□□□□ -0.37
TNFSF4P23510 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
TNFSF4P23510 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.75□□□□□ -0.37
TNFSF4P23510 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
TNFSF4P23510 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.75□□□□□ -0.37
TNFSF4P23510 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
TNFSF4P23510 SALL4P5-201ENST00000419001 1760 ntBASIC12.75□□□□□ -0.37
TNFSF4P23510 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.75□□□□□ -0.37
TNFSF4P23510 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.75□□□□□ -0.37
TNFSF4P23510 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TNFSF4P23510 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.75□□□□□ -0.37
TNFSF4P23510 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.75□□□□□ -0.37
TNFSF4P23510 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.75□□□□□ -0.37
TNFSF4P23510 COX5BP1-201ENST00000507622 393 ntBASIC12.75□□□□□ -0.37
TNFSF4P23510 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.75□□□□□ -0.37
TNFSF4P23510 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.75□□□□□ -0.37
TNFSF4P23510 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.75□□□□□ -0.37
TNFSF4P23510 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
TNFSF4P23510 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.75□□□□□ -0.37
TNFSF4P23510 OR10B1P-201ENST00000601666 907 ntBASIC12.75□□□□□ -0.37
TNFSF4P23510 AL008721.1-201ENST00000609964 604 ntBASIC12.75□□□□□ -0.37
TNFSF4P23510 AC008687.7-202ENST00000637404 953 ntBASIC12.75□□□□□ -0.37
TNFSF4P23510 AC126335.2-201ENST00000623362 4637 ntBASIC12.75□□□□□ -0.37
TNFSF4P23510 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.75□□□□□ -0.37
TNFSF4P23510 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
TNFSF4P23510 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TNFSF4P23510 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TNFSF4P23510 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.74□□□□□ -0.37
TNFSF4P23510 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TNFSF4P23510 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.74□□□□□ -0.37
TNFSF4P23510 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
TNFSF4P23510 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.74□□□□□ -0.37
TNFSF4P23510 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
TNFSF4P23510 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
TNFSF4P23510 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.74□□□□□ -0.37
TNFSF4P23510 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
TNFSF4P23510 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.74□□□□□ -0.37
TNFSF4P23510 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.74□□□□□ -0.37
TNFSF4P23510 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 CLUHP2-201ENST00000426660 1303 ntBASIC12.74□□□□□ -0.37
TNFSF4P23510 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.74□□□□□ -0.37
TNFSF4P23510 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.74□□□□□ -0.37
TNFSF4P23510 CSF2RBP1-201ENST00000447905 391 ntBASIC12.74□□□□□ -0.37
TNFSF4P23510 HOMER2P2-201ENST00000451621 847 ntBASIC12.74□□□□□ -0.37
TNFSF4P23510 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.74□□□□□ -0.37
TNFSF4P23510 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.74□□□□□ -0.37
TNFSF4P23510 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.74□□□□□ -0.37
TNFSF4P23510 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.74□□□□□ -0.37
TNFSF4P23510 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.74□□□□□ -0.37
TNFSF4P23510 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.74□□□□□ -0.37
TNFSF4P23510 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.74□□□□□ -0.37
TNFSF4P23510 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.74□□□□□ -0.37
TNFSF4P23510 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
TNFSF4P23510 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TNFSF4P23510 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
TNFSF4P23510 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
TNFSF4P23510 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 306.2 ms