Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KCNA3P22001 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KCNA3P22001 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KCNA3P22001 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
KCNA3P22001 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KCNA3P22001 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KCNA3P22001 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KCNA3P22001 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC17.78■□□□□ 0.44
KCNA3P22001 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC17.78■□□□□ 0.44
KCNA3P22001 RN7SL121P-201ENST00000584223 273 ntBASIC17.78■□□□□ 0.44
KCNA3P22001 AL591471.1-201ENST00000621855 229 ntBASIC17.78■□□□□ 0.44
KCNA3P22001 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
KCNA3P22001 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.78■□□□□ 0.44
KCNA3P22001 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
KCNA3P22001 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
KCNA3P22001 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KCNA3P22001 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.78■□□□□ 0.44
KCNA3P22001 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KCNA3P22001 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KCNA3P22001 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KCNA3P22001 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.78■□□□□ 0.44
KCNA3P22001 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KCNA3P22001 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.78■□□□□ 0.44
KCNA3P22001 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.78■□□□□ 0.44
KCNA3P22001 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KCNA3P22001 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
KCNA3P22001 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KCNA3P22001 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.77■□□□□ 0.44
KCNA3P22001 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
KCNA3P22001 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.77■□□□□ 0.44
KCNA3P22001 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KCNA3P22001 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
KCNA3P22001 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
KCNA3P22001 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KCNA3P22001 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KCNA3P22001 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KCNA3P22001 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KCNA3P22001 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KCNA3P22001 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KCNA3P22001 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KCNA3P22001 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC17.77■□□□□ 0.44
KCNA3P22001 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
KCNA3P22001 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.77■□□□□ 0.44
KCNA3P22001 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.77■□□□□ 0.44
KCNA3P22001 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KCNA3P22001 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
KCNA3P22001 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KCNA3P22001 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
KCNA3P22001 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KCNA3P22001 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
KCNA3P22001 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KCNA3P22001 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
KCNA3P22001 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC17.77■□□□□ 0.44
KCNA3P22001 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC17.77■□□□□ 0.44
KCNA3P22001 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC17.77■□□□□ 0.44
KCNA3P22001 KRT8P2-201ENST00000556193 944 ntBASIC17.77■□□□□ 0.44
KCNA3P22001 AC023968.2-201ENST00000560593 1049 ntBASIC17.77■□□□□ 0.44
KCNA3P22001 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC17.77■□□□□ 0.44
KCNA3P22001 DRG2-220ENST00000583355 891 ntTSL 3 BASIC17.77■□□□□ 0.44
KCNA3P22001 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
KCNA3P22001 AC090386.2-201ENST00000623010 1039 ntBASIC17.77■□□□□ 0.44
KCNA3P22001 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC17.77■□□□□ 0.44
KCNA3P22001 AP000769.1-203ENST00000637245 208 ntBASIC17.77■□□□□ 0.44
KCNA3P22001 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
KCNA3P22001 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.77■□□□□ 0.44
KCNA3P22001 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KCNA3P22001 CYP2T1P-202ENST00000641596 2535 ntBASIC17.77■□□□□ 0.44
KCNA3P22001 MROH4P-201ENST00000431302 1578 ntBASIC17.77■□□□□ 0.44
KCNA3P22001 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
KCNA3P22001 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
KCNA3P22001 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.77■□□□□ 0.43
KCNA3P22001 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
KCNA3P22001 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
KCNA3P22001 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.77■□□□□ 0.43
KCNA3P22001 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
KCNA3P22001 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC17.77■□□□□ 0.43
KCNA3P22001 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC17.77■□□□□ 0.43
KCNA3P22001 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
KCNA3P22001 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.77■□□□□ 0.43
KCNA3P22001 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC17.77■□□□□ 0.43
KCNA3P22001 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.77■□□□□ 0.43
KCNA3P22001 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.77■□□□□ 0.43
KCNA3P22001 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.77■□□□□ 0.43
KCNA3P22001 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
KCNA3P22001 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KCNA3P22001 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KCNA3P22001 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
KCNA3P22001 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KCNA3P22001 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
KCNA3P22001 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KCNA3P22001 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KCNA3P22001 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KCNA3P22001 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
KCNA3P22001 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KCNA3P22001 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
KCNA3P22001 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
KCNA3P22001 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC17.76■□□□□ 0.43
KCNA3P22001 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
KCNA3P22001 AC008026.2-201ENST00000495438 348 ntBASIC17.76■□□□□ 0.43
KCNA3P22001 KRT18P37-201ENST00000520711 1282 ntBASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms