Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 SNHG20-202ENST00000434411 2143 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RAB4AP20338 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC11.45□□□□□ -0.58
RAB4AP20338 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC11.45□□□□□ -0.58
RAB4AP20338 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB4AP20338 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RAB4AP20338 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB4AP20338 SUPT20HL1-201ENST00000436466 2618 ntBASIC11.45□□□□□ -0.58
RAB4AP20338 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC11.45□□□□□ -0.58
RAB4AP20338 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC11.45□□□□□ -0.58
RAB4AP20338 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
RAB4AP20338 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC11.45□□□□□ -0.58
RAB4AP20338 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
RAB4AP20338 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
RAB4AP20338 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC11.45□□□□□ -0.58
RAB4AP20338 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC11.45□□□□□ -0.58
RAB4AP20338 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC11.45□□□□□ -0.58
RAB4AP20338 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB4AP20338 DRC7-203ENST00000394337 2906 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB4AP20338 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB4AP20338 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB4AP20338 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RAB4AP20338 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB4AP20338 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RAB4AP20338 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC11.45□□□□□ -0.58
RAB4AP20338 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC11.45□□□□□ -0.58
RAB4AP20338 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC11.45□□□□□ -0.58
RAB4AP20338 FIS1-203ENST00000442303 631 ntTSL 3 BASIC11.45□□□□□ -0.58
RAB4AP20338 FOSL1P1-201ENST00000511041 816 ntBASIC11.45□□□□□ -0.58
RAB4AP20338 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC11.45□□□□□ -0.58
RAB4AP20338 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
RAB4AP20338 AL078644.1-201ENST00000609881 752 ntBASIC11.45□□□□□ -0.58
RAB4AP20338 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC11.45□□□□□ -0.58
RAB4AP20338 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB4AP20338 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC11.45□□□□□ -0.58
RAB4AP20338 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC11.45□□□□□ -0.58
RAB4AP20338 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC11.45□□□□□ -0.58
RAB4AP20338 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB4AP20338 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB4AP20338 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB4AP20338 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC11.45□□□□□ -0.58
RAB4AP20338 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC11.45□□□□□ -0.58
RAB4AP20338 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB4AP20338 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC11.45□□□□□ -0.58
RAB4AP20338 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RAB4AP20338 AL022323.5-201ENST00000624101 2059 ntBASIC11.45□□□□□ -0.58
RAB4AP20338 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC11.45□□□□□ -0.58
RAB4AP20338 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC11.45□□□□□ -0.58
RAB4AP20338 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RAB4AP20338 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC11.45□□□□□ -0.58
RAB4AP20338 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC11.45□□□□□ -0.58
RAB4AP20338 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC11.45□□□□□ -0.58
RAB4AP20338 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RAB4AP20338 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
RAB4AP20338 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB4AP20338 WBP1L-202ENST00000448841 4085 ntAPPRIS ALT1 TSL 2 BASIC11.45□□□□□ -0.58
RAB4AP20338 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB4AP20338 PBX1-203ENST00000420696 6636 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
RAB4AP20338 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC11.44□□□□□ -0.58
RAB4AP20338 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 CCNA1-201ENST00000255465 1879 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
RAB4AP20338 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC11.44□□□□□ -0.58
RAB4AP20338 ARHGEF10-203ENST00000398560 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC11.44□□□□□ -0.58
RAB4AP20338 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
RAB4AP20338 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
RAB4AP20338 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC11.44□□□□□ -0.58
RAB4AP20338 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
RAB4AP20338 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
RAB4AP20338 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
RAB4AP20338 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
RAB4AP20338 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC11.44□□□□□ -0.58
RAB4AP20338 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RAB4AP20338 MLF1-209ENST00000482628 1050 ntTSL 5 BASIC11.44□□□□□ -0.58
RAB4AP20338 CXCL1P1-201ENST00000502804 216 ntBASIC11.44□□□□□ -0.58
RAB4AP20338 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC11.44□□□□□ -0.58
RAB4AP20338 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC11.44□□□□□ -0.58
RAB4AP20338 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC11.44□□□□□ -0.58
RAB4AP20338 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC11.44□□□□□ -0.58
RAB4AP20338 ETFA-208ENST00000559602 792 ntTSL 3 BASIC11.44□□□□□ -0.58
RAB4AP20338 IRF8-202ENST00000562492 946 ntTSL 3 BASIC11.44□□□□□ -0.58
RAB4AP20338 PNMT-203ENST00000581428 677 ntTSL 2 BASIC11.44□□□□□ -0.58
RAB4AP20338 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC11.44□□□□□ -0.58
RAB4AP20338 AC092119.3-201ENST00000612618 583 ntBASIC11.44□□□□□ -0.58
RAB4AP20338 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC11.44□□□□□ -0.58
RAB4AP20338 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms