Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
ATF3P18847 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC19.93■□□□□ 0.78
ATF3P18847 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC19.93■□□□□ 0.78
ATF3P18847 NAA40-205ENST00000539656 577 ntTSL 4 BASIC19.93■□□□□ 0.78
ATF3P18847 AC145285.5-201ENST00000562217 361 ntBASIC19.93■□□□□ 0.78
ATF3P18847 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC19.93■□□□□ 0.78
ATF3P18847 SKA2-205ENST00000580541 689 ntTSL 3 BASIC19.93■□□□□ 0.78
ATF3P18847 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
ATF3P18847 AL359091.4-201ENST00000610052 409 ntBASIC19.93■□□□□ 0.78
ATF3P18847 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC19.93■□□□□ 0.78
ATF3P18847 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATF3P18847 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC19.93■□□□□ 0.78
ATF3P18847 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATF3P18847 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATF3P18847 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
ATF3P18847 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATF3P18847 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC19.93■□□□□ 0.78
ATF3P18847 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATF3P18847 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATF3P18847 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC19.93■□□□□ 0.78
ATF3P18847 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ATF3P18847 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATF3P18847 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
ATF3P18847 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC19.92■□□□□ 0.78
ATF3P18847 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC19.92■□□□□ 0.78
ATF3P18847 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
ATF3P18847 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATF3P18847 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC19.92■□□□□ 0.78
ATF3P18847 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATF3P18847 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATF3P18847 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
ATF3P18847 BAX-205ENST00000391871 687 ntTSL 5 BASIC19.92■□□□□ 0.78
ATF3P18847 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATF3P18847 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC19.92■□□□□ 0.78
ATF3P18847 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC19.92■□□□□ 0.78
ATF3P18847 HNRNPA1P42-201ENST00000458678 957 ntBASIC19.92■□□□□ 0.78
ATF3P18847 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC19.92■□□□□ 0.78
ATF3P18847 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATF3P18847 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATF3P18847 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC19.92■□□□□ 0.78
ATF3P18847 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATF3P18847 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.92■□□□□ 0.78
ATF3P18847 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATF3P18847 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATF3P18847 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATF3P18847 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATF3P18847 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
ATF3P18847 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATF3P18847 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATF3P18847 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATF3P18847 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATF3P18847 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.91■□□□□ 0.78
ATF3P18847 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATF3P18847 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATF3P18847 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATF3P18847 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATF3P18847 AL512599.1-201ENST00000430724 685 ntBASIC19.91■□□□□ 0.78
ATF3P18847 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATF3P18847 PFN2-212ENST00000490975 858 ntTSL 4 BASIC19.91■□□□□ 0.78
ATF3P18847 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC19.91■□□□□ 0.78
ATF3P18847 BCL2L12P1-201ENST00000508390 733 ntBASIC19.91■□□□□ 0.78
ATF3P18847 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC19.91■□□□□ 0.78
ATF3P18847 KNOP1P1-201ENST00000542108 989 ntBASIC19.91■□□□□ 0.78
ATF3P18847 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC19.91■□□□□ 0.78
ATF3P18847 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC19.91■□□□□ 0.78
ATF3P18847 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC19.91■□□□□ 0.78
ATF3P18847 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC19.91■□□□□ 0.78
ATF3P18847 AP005264.5-201ENST00000590066 467 ntBASIC19.91■□□□□ 0.78
ATF3P18847 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC19.91■□□□□ 0.78
ATF3P18847 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATF3P18847 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATF3P18847 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATF3P18847 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
ATF3P18847 MSANTD2P1-201ENST00000445341 1368 ntBASIC19.91■□□□□ 0.78
ATF3P18847 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.91■□□□□ 0.78
ATF3P18847 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATF3P18847 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATF3P18847 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.91■□□□□ 0.78
ATF3P18847 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATF3P18847 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC19.91■□□□□ 0.78
ATF3P18847 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.91■□□□□ 0.78
ATF3P18847 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC19.91■□□□□ 0.78
ATF3P18847 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.91■□□□□ 0.78
ATF3P18847 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC19.9■□□□□ 0.78
ATF3P18847 AC087481.3-201ENST00000602886 1894 ntBASIC19.9■□□□□ 0.78
ATF3P18847 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.9■□□□□ 0.78
ATF3P18847 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF3P18847 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF3P18847 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF3P18847 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.9■□□□□ 0.78
ATF3P18847 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF3P18847 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.9■□□□□ 0.78
ATF3P18847 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF3P18847 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF3P18847 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF3P18847 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF3P18847 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ATF3P18847 AC006504.5-208ENST00000588784 2401 ntBASIC19.9■□□□□ 0.78
ATF3P18847 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ATF3P18847 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms