Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN1P18031 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PTPN1P18031 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN1P18031 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.66■□□□□ 0.1
PTPN1P18031 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN1P18031 FAM58BP-201ENST00000439056 645 ntBASIC15.66■□□□□ 0.1
PTPN1P18031 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.66■□□□□ 0.1
PTPN1P18031 TUBB8P8-201ENST00000458717 1058 ntBASIC15.66■□□□□ 0.1
PTPN1P18031 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.66■□□□□ 0.1
PTPN1P18031 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.66■□□□□ 0.1
PTPN1P18031 AC103988.2-201ENST00000561804 725 ntBASIC15.66■□□□□ 0.1
PTPN1P18031 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN1P18031 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.66■□□□□ 0.1
PTPN1P18031 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN1P18031 AC022748.3-201ENST00000621828 275 ntBASIC15.66■□□□□ 0.1
PTPN1P18031 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PTPN1P18031 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN1P18031 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PTPN1P18031 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN1P18031 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.66■□□□□ 0.1
PTPN1P18031 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN1P18031 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PTPN1P18031 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN1P18031 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.66■□□□□ 0.1
PTPN1P18031 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN1P18031 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN1P18031 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.66■□□□□ 0.1
PTPN1P18031 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.66■□□□□ 0.1
PTPN1P18031 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN1P18031 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN1P18031 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN1P18031 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTPN1P18031 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PTPN1P18031 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.65■□□□□ 0.1
PTPN1P18031 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN1P18031 AC139712.1-201ENST00000378256 1875 ntBASIC15.65■□□□□ 0.1
PTPN1P18031 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN1P18031 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.65■□□□□ 0.1
PTPN1P18031 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN1P18031 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.65■□□□□ 0.1
PTPN1P18031 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN1P18031 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN1P18031 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN1P18031 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
PTPN1P18031 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN1P18031 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN1P18031 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
PTPN1P18031 MIR1247-201ENST00000408206 136 ntBASIC15.65■□□□□ 0.1
PTPN1P18031 GPAA1P2-201ENST00000417923 928 ntBASIC15.65■□□□□ 0.1
PTPN1P18031 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.65■□□□□ 0.1
PTPN1P18031 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN1P18031 SERPINA13P-202ENST00000478994 924 ntBASIC15.65■□□□□ 0.1
PTPN1P18031 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.65■□□□□ 0.1
PTPN1P18031 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.65■□□□□ 0.1
PTPN1P18031 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.65■□□□□ 0.1
PTPN1P18031 AC005324.6-201ENST00000587972 613 ntBASIC15.65■□□□□ 0.1
PTPN1P18031 BNIP3P13-201ENST00000599968 566 ntBASIC15.65■□□□□ 0.1
PTPN1P18031 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
PTPN1P18031 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN1P18031 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.65■□□□□ 0.1
PTPN1P18031 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
PTPN1P18031 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN1P18031 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN1P18031 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PTPN1P18031 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN1P18031 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN1P18031 AL354702.1-201ENST00000442006 1960 ntBASIC15.65■□□□□ 0.1
PTPN1P18031 AL590440.2-201ENST00000641973 1595 ntBASIC15.65■□□□□ 0.1
PTPN1P18031 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN1P18031 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.65■□□□□ 0.1
PTPN1P18031 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN1P18031 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN1P18031 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PTPN1P18031 CICP24-201ENST00000605464 2705 ntBASIC15.65■□□□□ 0.1
PTPN1P18031 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN1P18031 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTPN1P18031 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN1P18031 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.64■□□□□ 0.09
PTPN1P18031 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN1P18031 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN1P18031 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN1P18031 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN1P18031 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PTPN1P18031 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN1P18031 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN1P18031 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN1P18031 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.64■□□□□ 0.09
PTPN1P18031 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN1P18031 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN1P18031 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.64■□□□□ 0.09
PTPN1P18031 AC012441.2-201ENST00000444843 739 ntBASIC15.64■□□□□ 0.09
PTPN1P18031 KRT8P13-201ENST00000463294 1010 ntBASIC15.64■□□□□ 0.09
PTPN1P18031 AC099548.2-209ENST00000480264 625 ntBASIC15.64■□□□□ 0.09
PTPN1P18031 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.64■□□□□ 0.09
PTPN1P18031 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.64■□□□□ 0.09
PTPN1P18031 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.64■□□□□ 0.09
PTPN1P18031 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.64■□□□□ 0.09
PTPN1P18031 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PTPN1P18031 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN1P18031 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms