Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DOBP13765 TPM3P8-201ENST00000330554 643 ntBASIC13.32□□□□□ -0.28
HLA-DOBP13765 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DOBP13765 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 TPT1P11-201ENST00000458482 498 ntBASIC13.32□□□□□ -0.28
HLA-DOBP13765 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 AL022328.1-201ENST00000610050 478 ntBASIC13.32□□□□□ -0.28
HLA-DOBP13765 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 AC132938.4-201ENST00000623835 848 ntBASIC13.32□□□□□ -0.28
HLA-DOBP13765 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DOBP13765 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DOBP13765 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DOBP13765 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DOBP13765 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DOBP13765 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DOBP13765 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DOBP13765 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DOBP13765 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DOBP13765 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DOBP13765 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DOBP13765 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 AC092135.3-201ENST00000624151 1846 ntBASIC13.32□□□□□ -0.28
HLA-DOBP13765 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DOBP13765 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DOBP13765 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
HLA-DOBP13765 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DOBP13765 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DOBP13765 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.31□□□□□ -0.28
HLA-DOBP13765 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DOBP13765 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DOBP13765 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.31□□□□□ -0.28
HLA-DOBP13765 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
HLA-DOBP13765 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
HLA-DOBP13765 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
HLA-DOBP13765 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
HLA-DOBP13765 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DOBP13765 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DOBP13765 AC027601.5-201ENST00000624065 2482 ntBASIC13.31□□□□□ -0.28
HLA-DOBP13765 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.31□□□□□ -0.28
HLA-DOBP13765 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.31□□□□□ -0.28
HLA-DOBP13765 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DOBP13765 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DOBP13765 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.31□□□□□ -0.28
HLA-DOBP13765 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HLA-DOBP13765 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.31□□□□□ -0.28
HLA-DOBP13765 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DOBP13765 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.31□□□□□ -0.28
HLA-DOBP13765 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HLA-DOBP13765 FAM197Y7-201ENST00000432892 766 ntBASIC13.31□□□□□ -0.28
HLA-DOBP13765 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DOBP13765 FTLP10-202ENST00000505798 471 ntBASIC13.31□□□□□ -0.28
HLA-DOBP13765 AC131206.1-201ENST00000538078 1211 ntBASIC13.31□□□□□ -0.28
HLA-DOBP13765 AC005225.4-201ENST00000557330 545 ntBASIC13.31□□□□□ -0.28
HLA-DOBP13765 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DOBP13765 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.31□□□□□ -0.28
HLA-DOBP13765 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.31□□□□□ -0.28
HLA-DOBP13765 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DOBP13765 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.31□□□□□ -0.28
HLA-DOBP13765 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DOBP13765 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DOBP13765 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
HLA-DOBP13765 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.31□□□□□ -0.28
HLA-DOBP13765 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DOBP13765 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DOBP13765 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DOBP13765 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DOBP13765 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DOBP13765 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DOBP13765 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DOBP13765 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DOBP13765 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DOBP13765 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DOBP13765 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DOBP13765 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DOBP13765 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-DOBP13765 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-DOBP13765 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms