Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CFTRP13569 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC24.44■■□□□ 1.5
CFTRP13569 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC24.44■■□□□ 1.5
CFTRP13569 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC24.44■■□□□ 1.5
CFTRP13569 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CFTRP13569 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC24.44■■□□□ 1.5
CFTRP13569 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC24.44■■□□□ 1.5
CFTRP13569 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CFTRP13569 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CFTRP13569 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CFTRP13569 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CFTRP13569 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CFTRP13569 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC24.44■■□□□ 1.5
CFTRP13569 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC24.44■■□□□ 1.5
CFTRP13569 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
CFTRP13569 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC24.44■■□□□ 1.5
CFTRP13569 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC24.44■■□□□ 1.5
CFTRP13569 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC24.44■■□□□ 1.5
CFTRP13569 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC24.44■■□□□ 1.5
CFTRP13569 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC24.44■■□□□ 1.5
CFTRP13569 PHF23-213ENST00000613632 850 ntTSL 5 BASIC24.44■■□□□ 1.5
CFTRP13569 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC24.43■■□□□ 1.5
CFTRP13569 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC24.43■■□□□ 1.5
CFTRP13569 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
CFTRP13569 CELP-203ENST00000624767 2414 ntTSL 5 BASIC24.43■■□□□ 1.5
CFTRP13569 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC24.43■■□□□ 1.5
CFTRP13569 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC24.43■■□□□ 1.5
CFTRP13569 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CFTRP13569 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CFTRP13569 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CFTRP13569 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CFTRP13569 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC24.43■■□□□ 1.5
CFTRP13569 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
CFTRP13569 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC24.43■■□□□ 1.5
CFTRP13569 AL359219.1-201ENST00000556311 934 ntBASIC24.43■■□□□ 1.5
CFTRP13569 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
CFTRP13569 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC24.43■■□□□ 1.5
CFTRP13569 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC24.43■■□□□ 1.5
CFTRP13569 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC24.43■■□□□ 1.5
CFTRP13569 AL031673.1-201ENST00000611460 466 ntBASIC24.43■■□□□ 1.5
CFTRP13569 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC24.43■■□□□ 1.5
CFTRP13569 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CFTRP13569 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CFTRP13569 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
CFTRP13569 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CFTRP13569 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CFTRP13569 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC24.42■■□□□ 1.5
CFTRP13569 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
CFTRP13569 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
CFTRP13569 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CFTRP13569 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CFTRP13569 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC24.42■■□□□ 1.5
CFTRP13569 TBC1D27-202ENST00000424239 1573 ntBASIC24.42■■□□□ 1.5
CFTRP13569 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CFTRP13569 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CFTRP13569 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
CFTRP13569 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC24.42■■□□□ 1.5
CFTRP13569 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CFTRP13569 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CFTRP13569 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC24.42■■□□□ 1.5
CFTRP13569 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC24.42■■□□□ 1.5
CFTRP13569 KRT8P30-201ENST00000432100 650 ntBASIC24.42■■□□□ 1.5
CFTRP13569 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CFTRP13569 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CFTRP13569 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CFTRP13569 AC100858.1-201ENST00000514059 1228 ntBASIC24.42■■□□□ 1.5
CFTRP13569 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC24.42■■□□□ 1.5
CFTRP13569 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC24.42■■□□□ 1.5
CFTRP13569 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC24.42■■□□□ 1.5
CFTRP13569 HNRNPA1P16-201ENST00000575692 955 ntBASIC24.42■■□□□ 1.5
CFTRP13569 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
CFTRP13569 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CFTRP13569 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CFTRP13569 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CFTRP13569 AC007952.5-201ENST00000572818 1486 ntBASIC24.42■■□□□ 1.5
CFTRP13569 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CFTRP13569 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC24.42■■□□□ 1.5
CFTRP13569 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
CFTRP13569 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CFTRP13569 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
CFTRP13569 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
CFTRP13569 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
CFTRP13569 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
CFTRP13569 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC24.41■■□□□ 1.5
CFTRP13569 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CFTRP13569 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CFTRP13569 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
CFTRP13569 OR2W2P-201ENST00000406313 909 ntBASIC24.41■■□□□ 1.5
CFTRP13569 HNRNPA3P6-201ENST00000472163 1006 ntBASIC24.41■■□□□ 1.5
CFTRP13569 MIR2278-201ENST00000516344 96 ntBASIC24.41■■□□□ 1.5
CFTRP13569 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC24.41■■□□□ 1.5
CFTRP13569 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CFTRP13569 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
CFTRP13569 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CFTRP13569 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CFTRP13569 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CFTRP13569 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC24.41■■□□□ 1.5
CFTRP13569 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CFTRP13569 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC24.41■■□□□ 1.5
CFTRP13569 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms