Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.52□□□□□ -0.09
CDH1P12830 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CDH1P12830 GNRHR2-203ENST00000581100 1187 ntBASIC14.52□□□□□ -0.09
CDH1P12830 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.52□□□□□ -0.09
CDH1P12830 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH1P12830 BTNL10-201ENST00000595971 695 ntBASIC14.52□□□□□ -0.09
CDH1P12830 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.52□□□□□ -0.09
CDH1P12830 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH1P12830 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.52□□□□□ -0.09
CDH1P12830 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH1P12830 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH1P12830 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH1P12830 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH1P12830 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH1P12830 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH1P12830 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.52□□□□□ -0.09
CDH1P12830 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH1P12830 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH1P12830 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH1P12830 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH1P12830 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH1P12830 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CDH1P12830 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CDH1P12830 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH1P12830 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH1P12830 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH1P12830 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH1P12830 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CDH1P12830 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH1P12830 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH1P12830 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH1P12830 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CDH1P12830 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH1P12830 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH1P12830 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH1P12830 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH1P12830 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH1P12830 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH1P12830 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH1P12830 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH1P12830 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH1P12830 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH1P12830 AC092933.1-201ENST00000393644 945 ntBASIC14.51□□□□□ -0.09
CDH1P12830 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH1P12830 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH1P12830 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.51□□□□□ -0.09
CDH1P12830 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH1P12830 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH1P12830 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.51□□□□□ -0.09
CDH1P12830 CR383656.12-201ENST00000549567 513 ntBASIC14.51□□□□□ -0.09
CDH1P12830 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH1P12830 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.51□□□□□ -0.09
CDH1P12830 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.51□□□□□ -0.09
CDH1P12830 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH1P12830 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH1P12830 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.51□□□□□ -0.09
CDH1P12830 AL022328.1-201ENST00000610050 478 ntBASIC14.51□□□□□ -0.09
CDH1P12830 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH1P12830 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH1P12830 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH1P12830 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH1P12830 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDH1P12830 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH1P12830 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDH1P12830 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH1P12830 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH1P12830 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
CDH1P12830 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH1P12830 AC152010.1-201ENST00000415779 2006 ntBASIC14.51□□□□□ -0.09
CDH1P12830 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDH1P12830 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH1P12830 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH1P12830 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDH1P12830 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
CDH1P12830 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH1P12830 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH1P12830 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH1P12830 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CDH1P12830 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH1P12830 AC010327.5-201ENST00000586923 3061 ntBASIC14.5□□□□□ -0.09
CDH1P12830 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH1P12830 AC015802.1-201ENST00000588104 1449 ntBASIC14.5□□□□□ -0.09
CDH1P12830 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH1P12830 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CDH1P12830 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH1P12830 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH1P12830 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH1P12830 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH1P12830 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH1P12830 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH1P12830 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH1P12830 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH1P12830 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH1P12830 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH1P12830 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH1P12830 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH1P12830 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CDH1P12830 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CDH1P12830 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CDH1P12830 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms