Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 HMGN1P19-201ENST00000436976 333 ntBASIC14.54□□□□□ -0.08
PCNAP12004 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.54□□□□□ -0.08
PCNAP12004 KRT18P25-201ENST00000508931 1278 ntBASIC14.54□□□□□ -0.08
PCNAP12004 ENPP7P5-201ENST00000541031 1031 ntBASIC14.54□□□□□ -0.08
PCNAP12004 TP53TG3HP-202ENST00000569755 579 ntBASIC14.54□□□□□ -0.08
PCNAP12004 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.54□□□□□ -0.08
PCNAP12004 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.54□□□□□ -0.08
PCNAP12004 AC092364.2-202ENST00000597012 1073 ntBASIC14.54□□□□□ -0.08
PCNAP12004 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.54□□□□□ -0.08
PCNAP12004 AP005019.2-201ENST00000615104 511 ntBASIC14.54□□□□□ -0.08
PCNAP12004 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.54□□□□□ -0.08
PCNAP12004 AL033527.5-201ENST00000641382 801 ntBASIC14.54□□□□□ -0.08
PCNAP12004 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCNAP12004 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCNAP12004 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCNAP12004 AC018665.1-201ENST00000622927 1362 ntBASIC14.54□□□□□ -0.08
PCNAP12004 AC126335.2-201ENST00000623362 4637 ntBASIC14.54□□□□□ -0.08
PCNAP12004 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.54□□□□□ -0.08
PCNAP12004 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
PCNAP12004 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.54□□□□□ -0.08
PCNAP12004 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.54□□□□□ -0.08
PCNAP12004 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.54□□□□□ -0.08
PCNAP12004 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.54□□□□□ -0.08
PCNAP12004 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.54□□□□□ -0.08
PCNAP12004 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCNAP12004 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCNAP12004 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCNAP12004 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCNAP12004 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCNAP12004 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCNAP12004 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.54□□□□□ -0.08
PCNAP12004 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
PCNAP12004 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
PCNAP12004 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PCNAP12004 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PCNAP12004 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCNAP12004 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCNAP12004 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCNAP12004 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCNAP12004 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.53□□□□□ -0.08
PCNAP12004 AP001267.2-201ENST00000532619 2086 ntBASIC14.53□□□□□ -0.08
PCNAP12004 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCNAP12004 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCNAP12004 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCNAP12004 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCNAP12004 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PCNAP12004 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCNAP12004 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.53□□□□□ -0.08
PCNAP12004 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCNAP12004 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCNAP12004 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCNAP12004 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.53□□□□□ -0.08
PCNAP12004 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCNAP12004 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.53□□□□□ -0.08
PCNAP12004 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PCNAP12004 DGCR5-201ENST00000399539 862 ntBASIC14.53□□□□□ -0.08
PCNAP12004 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.53□□□□□ -0.08
PCNAP12004 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCNAP12004 AP001063.1-201ENST00000568332 529 ntBASIC14.53□□□□□ -0.08
PCNAP12004 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.53□□□□□ -0.08
PCNAP12004 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCNAP12004 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCNAP12004 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PCNAP12004 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.53□□□□□ -0.08
PCNAP12004 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.53□□□□□ -0.08
PCNAP12004 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCNAP12004 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCNAP12004 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PCNAP12004 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCNAP12004 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCNAP12004 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCNAP12004 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.53□□□□□ -0.08
PCNAP12004 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCNAP12004 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
PCNAP12004 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
PCNAP12004 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCNAP12004 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.52□□□□□ -0.08
PCNAP12004 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCNAP12004 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.52□□□□□ -0.08
PCNAP12004 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCNAP12004 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
PCNAP12004 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
PCNAP12004 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCNAP12004 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
PCNAP12004 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCNAP12004 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCNAP12004 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCNAP12004 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.52□□□□□ -0.08
PCNAP12004 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCNAP12004 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCNAP12004 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCNAP12004 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCNAP12004 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
PCNAP12004 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCNAP12004 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCNAP12004 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.52□□□□□ -0.09
PCNAP12004 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.52□□□□□ -0.09
PCNAP12004 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.52□□□□□ -0.09
PCNAP12004 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.52□□□□□ -0.09
PCNAP12004 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms