Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
FAM228BP0C875 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FAM228BP0C875 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FAM228BP0C875 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.81■□□□□ 0.12
FAM228BP0C875 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FAM228BP0C875 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
FAM228BP0C875 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.81■□□□□ 0.12
FAM228BP0C875 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FAM228BP0C875 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.81■□□□□ 0.12
FAM228BP0C875 POM121L8P-201ENST00000417732 1281 ntBASIC15.81■□□□□ 0.12
FAM228BP0C875 POM121L9P-203ENST00000441984 1285 ntBASIC15.81■□□□□ 0.12
FAM228BP0C875 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.81■□□□□ 0.12
FAM228BP0C875 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.81■□□□□ 0.12
FAM228BP0C875 TSPY16P-201ENST00000449843 468 ntBASIC15.81■□□□□ 0.12
FAM228BP0C875 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FAM228BP0C875 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
FAM228BP0C875 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FAM228BP0C875 AC008494.3-201ENST00000606615 944 ntBASIC15.81■□□□□ 0.12
FAM228BP0C875 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.81■□□□□ 0.12
FAM228BP0C875 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.81■□□□□ 0.12
FAM228BP0C875 AC130686.1-201ENST00000622936 2466 ntBASIC15.81■□□□□ 0.12
FAM228BP0C875 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.81■□□□□ 0.12
FAM228BP0C875 CU634019.7-201ENST00000624153 1185 ntBASIC15.81■□□□□ 0.12
FAM228BP0C875 FP236241.2-201ENST00000624906 1185 ntBASIC15.81■□□□□ 0.12
FAM228BP0C875 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
FAM228BP0C875 AC079781.5-202ENST00000641784 3743 ntBASIC15.81■□□□□ 0.12
FAM228BP0C875 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FAM228BP0C875 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
FAM228BP0C875 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
FAM228BP0C875 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.81■□□□□ 0.12
FAM228BP0C875 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
FAM228BP0C875 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FAM228BP0C875 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FAM228BP0C875 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.8■□□□□ 0.12
FAM228BP0C875 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
FAM228BP0C875 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FAM228BP0C875 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
FAM228BP0C875 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
FAM228BP0C875 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FAM228BP0C875 AC139712.1-201ENST00000378256 1875 ntBASIC15.8■□□□□ 0.12
FAM228BP0C875 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
FAM228BP0C875 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.8■□□□□ 0.12
FAM228BP0C875 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FAM228BP0C875 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
FAM228BP0C875 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
FAM228BP0C875 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FAM228BP0C875 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.8■□□□□ 0.12
FAM228BP0C875 ST20-AS1-201ENST00000560255 4223 ntBASIC15.8■□□□□ 0.12
FAM228BP0C875 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
FAM228BP0C875 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.8■□□□□ 0.12
FAM228BP0C875 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
FAM228BP0C875 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.8■□□□□ 0.12
FAM228BP0C875 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FAM228BP0C875 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FAM228BP0C875 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.8■□□□□ 0.12
FAM228BP0C875 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.8■□□□□ 0.12
FAM228BP0C875 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
FAM228BP0C875 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FAM228BP0C875 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
FAM228BP0C875 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
FAM228BP0C875 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FAM228BP0C875 WASH4P-201ENST00000564273 1246 ntBASIC15.8■□□□□ 0.12
FAM228BP0C875 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.8■□□□□ 0.12
FAM228BP0C875 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.8■□□□□ 0.12
FAM228BP0C875 AC004233.3-201ENST00000607794 1269 ntBASIC15.8■□□□□ 0.12
FAM228BP0C875 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.8■□□□□ 0.12
FAM228BP0C875 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FAM228BP0C875 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FAM228BP0C875 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FAM228BP0C875 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.8■□□□□ 0.12
FAM228BP0C875 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FAM228BP0C875 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
FAM228BP0C875 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
FAM228BP0C875 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
FAM228BP0C875 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FAM228BP0C875 KHSRPP1-201ENST00000427983 1768 ntBASIC15.8■□□□□ 0.12
FAM228BP0C875 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.79■□□□□ 0.12
FAM228BP0C875 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FAM228BP0C875 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FAM228BP0C875 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FAM228BP0C875 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.79■□□□□ 0.12
FAM228BP0C875 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
FAM228BP0C875 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FAM228BP0C875 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FAM228BP0C875 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
FAM228BP0C875 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FAM228BP0C875 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.79■□□□□ 0.12
FAM228BP0C875 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.79■□□□□ 0.12
FAM228BP0C875 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
FAM228BP0C875 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FAM228BP0C875 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
FAM228BP0C875 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FAM228BP0C875 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FAM228BP0C875 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
FAM228BP0C875 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
FAM228BP0C875 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.79■□□□□ 0.12
FAM228BP0C875 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.79■□□□□ 0.12
FAM228BP0C875 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.79■□□□□ 0.12
FAM228BP0C875 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.79■□□□□ 0.12
FAM228BP0C875 AL162726.2-201ENST00000438986 1017 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms