Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 AC003102.2-201ENST00000589195 1469 ntBASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RAB40ALP0C0E4 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 GRK6P1-201ENST00000400595 1711 ntBASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 AC023908.3-201ENST00000564211 3047 ntBASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 CICP23-201ENST00000605013 2741 ntBASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 MROH4P-201ENST00000431302 1578 ntBASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 Z97180.1-201ENST00000445173 988 ntBASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 PUDPP3-201ENST00000445368 636 ntBASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 AC104073.2-201ENST00000453737 312 ntBASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 AC132192.2-201ENST00000596206 1147 ntBASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 BX088702.1-201ENST00000610784 235 ntBASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 AC015967.2-201ENST00000624092 234 ntBASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 AC006435.4-201ENST00000625037 234 ntBASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 AL356737.1-201ENST00000634391 234 ntBASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 AL805961.1-203ENST00000641078 1258 ntBASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 AC026748.1-201ENST00000624349 3251 ntBASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 E2F3P2-201ENST00000447755 1422 ntBASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40ALP0C0E4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 AC020910.5-201ENST00000623668 1865 ntBASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 AC245884.6-201ENST00000515672 1067 ntBASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 AC090164.2-201ENST00000611487 516 ntBASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.97□□□□□ -0.17
RAB40ALP0C0E4 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms