Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLTAP09496 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLTAP09496 AL136309.1-201ENST00000403917 691 ntBASIC16.27■□□□□ 0.2
CLTAP09496 RPL13AP20-201ENST00000459725 609 ntBASIC16.27■□□□□ 0.2
CLTAP09496 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CLTAP09496 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLTAP09496 EEF1DP1-201ENST00000585891 896 ntBASIC16.27■□□□□ 0.2
CLTAP09496 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.27■□□□□ 0.2
CLTAP09496 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CLTAP09496 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLTAP09496 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.27■□□□□ 0.2
CLTAP09496 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.27■□□□□ 0.2
CLTAP09496 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.27■□□□□ 0.19
CLTAP09496 AC005840.4-201ENST00000541242 2494 ntBASIC16.27■□□□□ 0.19
CLTAP09496 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLTAP09496 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.27■□□□□ 0.19
CLTAP09496 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLTAP09496 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.27■□□□□ 0.19
CLTAP09496 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CLTAP09496 INE2-201ENST00000630399 1874 ntBASIC16.27■□□□□ 0.19
CLTAP09496 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLTAP09496 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLTAP09496 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.27■□□□□ 0.19
CLTAP09496 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CLTAP09496 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.26■□□□□ 0.19
CLTAP09496 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLTAP09496 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLTAP09496 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLTAP09496 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CLTAP09496 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLTAP09496 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.26■□□□□ 0.19
CLTAP09496 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLTAP09496 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLTAP09496 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.26■□□□□ 0.19
CLTAP09496 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CLTAP09496 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CLTAP09496 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLTAP09496 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLTAP09496 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLTAP09496 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CLTAP09496 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.26■□□□□ 0.19
CLTAP09496 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.26■□□□□ 0.19
CLTAP09496 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLTAP09496 CHMP1AP1-201ENST00000445563 662 ntBASIC16.26■□□□□ 0.19
CLTAP09496 Z93015.1-201ENST00000451718 390 ntBASIC16.26■□□□□ 0.19
CLTAP09496 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLTAP09496 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.26■□□□□ 0.19
CLTAP09496 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.26■□□□□ 0.19
CLTAP09496 AC007191.1-201ENST00000623179 2995 ntBASIC16.26■□□□□ 0.19
CLTAP09496 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.26■□□□□ 0.19
CLTAP09496 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CLTAP09496 CICP23-201ENST00000605013 2741 ntBASIC16.26■□□□□ 0.19
CLTAP09496 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLTAP09496 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLTAP09496 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
CLTAP09496 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.26■□□□□ 0.19
CLTAP09496 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLTAP09496 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CLTAP09496 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.26■□□□□ 0.19
CLTAP09496 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLTAP09496 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLTAP09496 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.26■□□□□ 0.19
CLTAP09496 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CLTAP09496 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CLTAP09496 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CLTAP09496 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLTAP09496 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CLTAP09496 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CLTAP09496 SALL4P5-201ENST00000419001 1760 ntBASIC16.26■□□□□ 0.19
CLTAP09496 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.25■□□□□ 0.19
CLTAP09496 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLTAP09496 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLTAP09496 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CLTAP09496 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLTAP09496 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLTAP09496 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.25■□□□□ 0.19
CLTAP09496 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLTAP09496 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.25■□□□□ 0.19
CLTAP09496 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CLTAP09496 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.25■□□□□ 0.19
CLTAP09496 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.25■□□□□ 0.19
CLTAP09496 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.25■□□□□ 0.19
CLTAP09496 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.25■□□□□ 0.19
CLTAP09496 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.25■□□□□ 0.19
CLTAP09496 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLTAP09496 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.25■□□□□ 0.19
CLTAP09496 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.25■□□□□ 0.19
CLTAP09496 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLTAP09496 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.25■□□□□ 0.19
CLTAP09496 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLTAP09496 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.25■□□□□ 0.19
CLTAP09496 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLTAP09496 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CLTAP09496 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.25■□□□□ 0.19
CLTAP09496 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLTAP09496 AL023775.1-201ENST00000454907 1746 ntBASIC16.25■□□□□ 0.19
CLTAP09496 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLTAP09496 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CLTAP09496 AC020910.5-201ENST00000623668 1865 ntBASIC16.25■□□□□ 0.19
CLTAP09496 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms