Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 AC010503.4-201ENST00000615487 688 ntBASIC9.14□□□□□ -0.95
PKHD1P08F94 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PKHD1P08F94 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PKHD1P08F94 AC026471.1-201ENST00000564629 3026 ntBASIC9.14□□□□□ -0.95
PKHD1P08F94 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PKHD1P08F94 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
PKHD1P08F94 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PKHD1P08F94 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PKHD1P08F94 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC9.14□□□□□ -0.95
PKHD1P08F94 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
PKHD1P08F94 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC9.14□□□□□ -0.95
PKHD1P08F94 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PKHD1P08F94 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC9.14□□□□□ -0.95
PKHD1P08F94 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
PKHD1P08F94 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC9.14□□□□□ -0.95
PKHD1P08F94 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PKHD1P08F94 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PKHD1P08F94 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC9.14□□□□□ -0.95
PKHD1P08F94 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PKHD1P08F94 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PKHD1P08F94 THAP4-203ENST00000402545 833 ntTSL 5 BASIC9.14□□□□□ -0.95
PKHD1P08F94 RN7SL788P-201ENST00000460504 316 ntBASIC9.14□□□□□ -0.95
PKHD1P08F94 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
PKHD1P08F94 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC9.14□□□□□ -0.95
PKHD1P08F94 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC9.14□□□□□ -0.95
PKHD1P08F94 AC120498.7-201ENST00000562876 330 ntBASIC9.14□□□□□ -0.95
PKHD1P08F94 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PKHD1P08F94 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
PKHD1P08F94 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC9.14□□□□□ -0.95
PKHD1P08F94 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
PKHD1P08F94 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
PKHD1P08F94 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC9.14□□□□□ -0.95
PKHD1P08F94 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
PKHD1P08F94 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
PKHD1P08F94 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
PKHD1P08F94 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC9.13□□□□□ -0.95
PKHD1P08F94 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PKHD1P08F94 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
PKHD1P08F94 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC9.13□□□□□ -0.95
PKHD1P08F94 AC087481.3-201ENST00000602886 1894 ntBASIC9.13□□□□□ -0.95
PKHD1P08F94 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC9.13□□□□□ -0.95
PKHD1P08F94 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC9.13□□□□□ -0.95
PKHD1P08F94 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC9.13□□□□□ -0.95
PKHD1P08F94 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
PKHD1P08F94 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PKHD1P08F94 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC9.13□□□□□ -0.95
PKHD1P08F94 HNRNPABP1-201ENST00000406003 734 ntBASIC9.13□□□□□ -0.95
PKHD1P08F94 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PKHD1P08F94 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
PKHD1P08F94 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PKHD1P08F94 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PKHD1P08F94 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PKHD1P08F94 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PKHD1P08F94 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PKHD1P08F94 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC9.13□□□□□ -0.95
PKHD1P08F94 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
PKHD1P08F94 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC9.13□□□□□ -0.95
PKHD1P08F94 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PKHD1P08F94 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PKHD1P08F94 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PKHD1P08F94 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC9.13□□□□□ -0.95
PKHD1P08F94 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
PKHD1P08F94 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC9.13□□□□□ -0.95
PKHD1P08F94 FAM226B-201ENST00000602508 1490 ntBASIC9.13□□□□□ -0.95
PKHD1P08F94 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC9.13□□□□□ -0.95
PKHD1P08F94 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PKHD1P08F94 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
PKHD1P08F94 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC9.13□□□□□ -0.95
PKHD1P08F94 FAM21EP-201ENST00000417804 985 ntBASIC9.13□□□□□ -0.95
PKHD1P08F94 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC9.13□□□□□ -0.95
PKHD1P08F94 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PKHD1P08F94 ASS1P2-201ENST00000439895 1223 ntBASIC9.13□□□□□ -0.95
PKHD1P08F94 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC9.13□□□□□ -0.95
PKHD1P08F94 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC9.13□□□□□ -0.95
PKHD1P08F94 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PKHD1P08F94 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC9.13□□□□□ -0.95
PKHD1P08F94 GGNBP1-204ENST00000613113 887 ntBASIC9.13□□□□□ -0.95
PKHD1P08F94 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
PKHD1P08F94 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
PKHD1P08F94 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PKHD1P08F94 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC9.13□□□□□ -0.95
PKHD1P08F94 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC9.13□□□□□ -0.95
PKHD1P08F94 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
PKHD1P08F94 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
PKHD1P08F94 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
PKHD1P08F94 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
PKHD1P08F94 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC9.13□□□□□ -0.95
PKHD1P08F94 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC9.13□□□□□ -0.95
PKHD1P08F94 SAT1-201ENST00000379251 801 ntTSL 2 BASIC9.13□□□□□ -0.95
PKHD1P08F94 SAT1-202ENST00000379253 909 ntTSL 2 BASIC9.13□□□□□ -0.95
PKHD1P08F94 SAT1-203ENST00000379254 868 ntTSL 3 BASIC9.13□□□□□ -0.95
PKHD1P08F94 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
PKHD1P08F94 AC073210.1-201ENST00000414799 232 ntBASIC9.13□□□□□ -0.95
PKHD1P08F94 EEF1DP2-201ENST00000433698 843 ntBASIC9.13□□□□□ -0.95
PKHD1P08F94 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC9.13□□□□□ -0.95
PKHD1P08F94 AC099328.1-201ENST00000498809 1030 ntBASIC9.13□□□□□ -0.95
PKHD1P08F94 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC9.13□□□□□ -0.95
PKHD1P08F94 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC9.13□□□□□ -0.95
PKHD1P08F94 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC9.13□□□□□ -0.95
PKHD1P08F94 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms