Protein–RNA interactions for Protein: P08922

ROS1, Proto-oncogene tyrosine-protein kinase ROS, humanhuman

Predictions only

Length 2,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ROS1P08922 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ROS1P08922 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ROS1P08922 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ROS1P08922 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ROS1P08922 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ROS1P08922 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ROS1P08922 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.8□□□□□ -0.36
ROS1P08922 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
ROS1P08922 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ROS1P08922 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ROS1P08922 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ROS1P08922 PTENP1-202ENST00000532280 3996 ntBASIC12.8□□□□□ -0.36
ROS1P08922 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ROS1P08922 MBLAC2-202ENST00000514906 1936 ntBASIC12.8□□□□□ -0.36
ROS1P08922 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ROS1P08922 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ROS1P08922 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.8□□□□□ -0.36
ROS1P08922 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ROS1P08922 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
ROS1P08922 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ROS1P08922 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ROS1P08922 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ROS1P08922 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC12.8□□□□□ -0.36
ROS1P08922 KLF2P1-201ENST00000447438 1042 ntBASIC12.8□□□□□ -0.36
ROS1P08922 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ROS1P08922 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC12.8□□□□□ -0.36
ROS1P08922 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC12.8□□□□□ -0.36
ROS1P08922 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
ROS1P08922 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ROS1P08922 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ROS1P08922 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
ROS1P08922 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ROS1P08922 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ROS1P08922 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ROS1P08922 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ROS1P08922 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.8□□□□□ -0.36
ROS1P08922 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
ROS1P08922 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
ROS1P08922 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
ROS1P08922 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 AC015909.3-201ENST00000572855 1794 ntBASIC12.79□□□□□ -0.36
ROS1P08922 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ROS1P08922 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
ROS1P08922 HLA-DQB2-229ENST00000411527 1059 ntBASIC12.79□□□□□ -0.36
ROS1P08922 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.79□□□□□ -0.36
ROS1P08922 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC12.79□□□□□ -0.36
ROS1P08922 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC12.79□□□□□ -0.36
ROS1P08922 PARP8-206ENST00000503665 572 ntTSL 4 BASIC12.79□□□□□ -0.36
ROS1P08922 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.79□□□□□ -0.36
ROS1P08922 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.79□□□□□ -0.36
ROS1P08922 AC079336.7-201ENST00000623428 1078 ntBASIC12.79□□□□□ -0.36
ROS1P08922 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
ROS1P08922 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ROS1P08922 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.79□□□□□ -0.36
ROS1P08922 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
ROS1P08922 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.79□□□□□ -0.36
ROS1P08922 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
ROS1P08922 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 AC023024.2-201ENST00000623561 1993 ntBASIC12.79□□□□□ -0.36
ROS1P08922 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
ROS1P08922 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
ROS1P08922 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.79□□□□□ -0.36
ROS1P08922 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 VDAC1P1-201ENST00000439229 848 ntBASIC12.79□□□□□ -0.36
ROS1P08922 EEF1DP6-201ENST00000449232 372 ntBASIC12.79□□□□□ -0.36
ROS1P08922 AL353637.1-201ENST00000451571 732 ntBASIC12.79□□□□□ -0.36
ROS1P08922 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.79□□□□□ -0.36
ROS1P08922 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.79□□□□□ -0.36
ROS1P08922 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC12.79□□□□□ -0.36
ROS1P08922 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
ROS1P08922 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.79□□□□□ -0.36
ROS1P08922 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.79□□□□□ -0.36
ROS1P08922 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.79□□□□□ -0.36
ROS1P08922 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ROS1P08922 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms