Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RHOP08100 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
RHOP08100 MIR4522-201ENST00000584932 87 ntBASIC15.22■□□□□ 0.03
RHOP08100 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.22■□□□□ 0.03
RHOP08100 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RHOP08100 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RHOP08100 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RHOP08100 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RHOP08100 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RHOP08100 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RHOP08100 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RHOP08100 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RHOP08100 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RHOP08100 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RHOP08100 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RHOP08100 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
RHOP08100 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RHOP08100 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RHOP08100 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.21■□□□□ 0.03
RHOP08100 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RHOP08100 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RHOP08100 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.21■□□□□ 0.03
RHOP08100 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RHOP08100 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RHOP08100 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RHOP08100 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RHOP08100 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RHOP08100 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RHOP08100 AC006504.5-208ENST00000588784 2401 ntBASIC15.21■□□□□ 0.03
RHOP08100 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
RHOP08100 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.21■□□□□ 0.03
RHOP08100 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RHOP08100 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RHOP08100 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.21■□□□□ 0.03
RHOP08100 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.21■□□□□ 0.03
RHOP08100 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.21■□□□□ 0.03
RHOP08100 AC079112.1-201ENST00000454972 939 ntBASIC15.21■□□□□ 0.03
RHOP08100 DUX4L50-201ENST00000455245 715 ntBASIC15.21■□□□□ 0.03
RHOP08100 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC15.21■□□□□ 0.03
RHOP08100 AC130709.1-201ENST00000484779 1212 ntBASIC15.21■□□□□ 0.03
RHOP08100 NDUFS6P1-201ENST00000485187 316 ntBASIC15.21■□□□□ 0.03
RHOP08100 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.21■□□□□ 0.03
RHOP08100 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC15.21■□□□□ 0.03
RHOP08100 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC15.21■□□□□ 0.03
RHOP08100 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.21■□□□□ 0.03
RHOP08100 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.21■□□□□ 0.03
RHOP08100 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.21■□□□□ 0.03
RHOP08100 AC007326.1-201ENST00000604539 458 ntBASIC15.21■□□□□ 0.03
RHOP08100 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RHOP08100 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RHOP08100 PPT1-215ENST00000641471 2368 ntBASIC15.21■□□□□ 0.03
RHOP08100 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.21■□□□□ 0.03
RHOP08100 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RHOP08100 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RHOP08100 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.21■□□□□ 0.03
RHOP08100 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
RHOP08100 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
RHOP08100 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RHOP08100 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
RHOP08100 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
RHOP08100 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.21■□□□□ 0.02
RHOP08100 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.2■□□□□ 0.02
RHOP08100 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RHOP08100 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RHOP08100 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RHOP08100 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RHOP08100 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
RHOP08100 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RHOP08100 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RHOP08100 KRT8P31-201ENST00000504812 1408 ntBASIC15.2■□□□□ 0.02
RHOP08100 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RHOP08100 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RHOP08100 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RHOP08100 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC15.2■□□□□ 0.02
RHOP08100 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RHOP08100 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.2■□□□□ 0.02
RHOP08100 AL627422.1-201ENST00000434104 580 ntBASIC15.2■□□□□ 0.02
RHOP08100 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RHOP08100 RN7SL530P-201ENST00000485097 298 ntBASIC15.2■□□□□ 0.02
RHOP08100 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RHOP08100 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RHOP08100 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.2■□□□□ 0.02
RHOP08100 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
RHOP08100 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RHOP08100 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC15.2■□□□□ 0.02
RHOP08100 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.2■□□□□ 0.02
RHOP08100 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.2■□□□□ 0.02
RHOP08100 DNM1P30-201ENST00000563586 452 ntBASIC15.2■□□□□ 0.02
RHOP08100 AC124068.2-201ENST00000569473 1109 ntBASIC15.2■□□□□ 0.02
RHOP08100 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.2■□□□□ 0.02
RHOP08100 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.2■□□□□ 0.02
RHOP08100 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.2■□□□□ 0.02
RHOP08100 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RHOP08100 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RHOP08100 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RHOP08100 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RHOP08100 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RHOP08100 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.2■□□□□ 0.02
RHOP08100 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RHOP08100 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms